Factsheet for HORVU6Hr1G037120.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10530.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G016260.1	Barley	cytosol	98.65	98.65
HORVU7Hr1G050690.1	Barley	cytosol, extracellular, nucleus	60.81	97.83
HORVU5Hr1G075250.1	Barley	cytosol	60.81	97.83
HORVU7Hr1G043570.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	97.3	97.3
HORVU2Hr1G046230.4	Barley	cytosol	54.05	40.4
HORVU4Hr1G011790.3	Barley	cytosol	62.16	8.66
HORVU2Hr1G124260.1	Barley	plastid	63.51	8.13
Zm00001d036359_P001	Maize	nucleus	50.0	7.27
EER88999	Sorghum	nucleus	50.0	7.25
GSMUA_Achr6P16550_001	Banana	cytosol	51.35	7.14
EES05140	Sorghum	nucleus	48.65	6.86
Os01t0183100-01	Rice	nucleus	48.65	6.74
TraesCS1B01G399700.1	Wheat	nucleus	48.65	6.74
TraesCS1D01G385600.1	Wheat	nucleus	47.3	6.64
KRG92087	Soybean	nucleus	43.24	5.98
VIT_13s0074g00030.t01	Wine grape	nucleus	43.24	5.97
KRH34701	Soybean	nucleus	41.89	5.79
Bra029849.1-P	Field mustard	nucleus	39.19	5.77
PGSC0003DMT400078468	Potato	nucleus	39.19	5.74
Solyc05g008190.2.1	Tomato	nucleus	39.19	5.5
CDY08595	Canola	mitochondrion, nucleus	39.19	5.3
CDY00951	Canola	plastid	39.19	5.26
CDY71163	Canola	nucleus	36.49	5.04
CDY41358	Canola	nucleus	36.49	5.04
Bra034124.1-P	Field mustard	nucleus	36.49	5.04
AT3G10530.1	Thale cress	nucleus	36.49	5.04
HORVU4Hr1G011830.1	Barley	cytosol, mitochondrion, nucleus	2.7	2.13

Protein Annotations

EnsemblPlants:HORVU6Hr1G037120.1

EnsemblPlantsGene:HORVU6Hr1G037120

PANTHER:PTHR14085

UniParc:UPI000B4649D2

UniProt:A0A287N832

MapMan:35.2

Description

No Description!

Coordinates

chrchr6H:-:185540080..185540304

Molecular Weight (calculated)

8526.5 Da

IEP (calculated)

5.721

GRAVY (calculated)

0.103

Length

74 amino acids

Sequence
(BLAST)

1: MKIVRELTSF FYAELGPYTL EYTSNGRYMI VGGRKGHIGM MDMLSMDLIK EFQVSSQYFS SFPSMLDVCN TFTI

Best Arabidopsis Sequence Match ( AT3G10530.1 )
(BLAST)

001: MEISSEDNNL MEKVLPPVEQ ESDVELETKV KKYLRGEGAN LETLKDKKLK TQLASREKLY GKSAKAAAKI EKWLLPAEAG YLETEGLEKT WRVKQTDIAN
101: EVDILSSRNQ YDIVLPDFGP YKLDFTASGR HMLAGGRKGH LALLDMMNMS LIKEIQVRET VRDVAFLHND QFFAAAQKKY AYIYGRDGTE LHCLKERGPV
201: ARLRFLKNHF LLASVNMSGQ LHYQDVTHGG MVASIRTGKG RTDVMEVNPY NSVVGLGHSG GTVTMWKPTS QAPLVQMQCH PGPVSSVAFH PNGHLMATSG
301: KERKIKIWDL RKFEEVQTIH SFHAKTLSFS QKGLLAAGTG SFVQILGDSS GGSSHNYTRY MNHSMVKGYQ IEKVMFRPYE DVIGIGHSMG WSSILIPGSG
401: EPNFDSWVAN PFETSKQRRE KEVHSLLDKL PPETIMLDPS KIGAMRPSRR KEKPSRGEIE AEKEVAIEAA KSTELKNKTK GRNKPSKRTK KKKEMVENAK
501: RTFPEQEHNT AIKKRRIVED AAAELPTSLK RFARKN

Arabidopsis Description

F18K10.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.