Factsheet for HORVU7Hr1G043570.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid, secretory
Any Predictor:	cytosol, nucleus, plastid, secretory
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10530.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G037120.1	Barley	cytosol, nucleus, plastid	97.3	97.3
HORVU6Hr1G016260.1	Barley	cytosol	95.95	95.95
HORVU7Hr1G050690.1	Barley	cytosol, extracellular, nucleus	59.46	95.65
HORVU5Hr1G075250.1	Barley	cytosol	59.46	95.65
HORVU2Hr1G046230.4	Barley	cytosol	51.35	38.38
HORVU4Hr1G011790.3	Barley	cytosol	59.46	8.29
HORVU2Hr1G124260.1	Barley	plastid	60.81	7.79
Zm00001d036359_P001	Maize	nucleus	47.3	6.88
EER88999	Sorghum	nucleus	47.3	6.86
GSMUA_Achr6P16550_001	Banana	cytosol	48.65	6.77
TraesCS1B01G399700.1	Wheat	nucleus	48.65	6.74
TraesCS1D01G385600.1	Wheat	nucleus	47.3	6.64
EES05140	Sorghum	nucleus	45.95	6.48
Os01t0183100-01	Rice	nucleus	45.95	6.37
KRG92087	Soybean	nucleus	41.89	5.79
KRH34701	Soybean	nucleus	40.54	5.61
VIT_13s0074g00030.t01	Wine grape	nucleus	40.54	5.6
Bra029849.1-P	Field mustard	nucleus	36.49	5.37
PGSC0003DMT400078468	Potato	nucleus	36.49	5.35
Solyc05g008190.2.1	Tomato	nucleus	36.49	5.12
CDY08595	Canola	mitochondrion, nucleus	36.49	4.94
CDY00951	Canola	plastid	36.49	4.9
CDY71163	Canola	nucleus	33.78	4.66
CDY41358	Canola	nucleus	33.78	4.66
Bra034124.1-P	Field mustard	nucleus	33.78	4.66
AT3G10530.1	Thale cress	nucleus	33.78	4.66
HORVU4Hr1G011830.1	Barley	cytosol, mitochondrion, nucleus	2.7	2.13

Protein Annotations

EnsemblPlants:HORVU7Hr1G043570.1

EnsemblPlantsGene:HORVU7Hr1G043570

PANTHER:PTHR14085

UniParc:UPI000B47C853

UniProt:A0A287W975

MapMan:35.2

Description

No Description!

Coordinates

chrchr7H:+:133027694..133027918

Molecular Weight (calculated)

8459.3 Da

IEP (calculated)

4.453

GRAVY (calculated)

0.203

Length

74 amino acids

Sequence
(BLAST)

1: MKIVRELTSF FYAELGPYTL EYTSNGCYMI VGGRKGHIGM MDMLSMDLIN EFQVSSQYFS SFPSMLDVCN TFTI

Best Arabidopsis Sequence Match ( AT3G10530.1 )
(BLAST)

001: MEISSEDNNL MEKVLPPVEQ ESDVELETKV KKYLRGEGAN LETLKDKKLK TQLASREKLY GKSAKAAAKI EKWLLPAEAG YLETEGLEKT WRVKQTDIAN
101: EVDILSSRNQ YDIVLPDFGP YKLDFTASGR HMLAGGRKGH LALLDMMNMS LIKEIQVRET VRDVAFLHND QFFAAAQKKY AYIYGRDGTE LHCLKERGPV
201: ARLRFLKNHF LLASVNMSGQ LHYQDVTHGG MVASIRTGKG RTDVMEVNPY NSVVGLGHSG GTVTMWKPTS QAPLVQMQCH PGPVSSVAFH PNGHLMATSG
301: KERKIKIWDL RKFEEVQTIH SFHAKTLSFS QKGLLAAGTG SFVQILGDSS GGSSHNYTRY MNHSMVKGYQ IEKVMFRPYE DVIGIGHSMG WSSILIPGSG
401: EPNFDSWVAN PFETSKQRRE KEVHSLLDKL PPETIMLDPS KIGAMRPSRR KEKPSRGEIE AEKEVAIEAA KSTELKNKTK GRNKPSKRTK KKKEMVENAK
501: RTFPEQEHNT AIKKRRIVED AAAELPTSLK RFARKN

Arabidopsis Description

F18K10.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.