Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41358 | Canola | nucleus | 89.18 | 89.18 |
| Bra029849.1-P | Field mustard | nucleus | 83.58 | 89.07 |
| CDY71163 | Canola | nucleus | 88.81 | 88.81 |
| Bra034124.1-P | Field mustard | nucleus | 88.62 | 88.62 |
| CDY08595 | Canola | mitochondrion, nucleus | 83.4 | 81.72 |
| CDY00951 | Canola | plastid | 83.77 | 81.49 |
| PGSC0003DMT400078468 | Potato | nucleus | 66.98 | 71.09 |
| VIT_13s0074g00030.t01 | Wine grape | nucleus | 70.71 | 70.71 |
| Solyc05g008190.2.1 | Tomato | nucleus | 68.66 | 69.83 |
| KRH34701 | Soybean | nucleus | 68.1 | 68.22 |
| KRG92087 | Soybean | nucleus | 67.91 | 68.04 |
| GSMUA_Achr6P16550_001 | Banana | cytosol | 65.11 | 65.6 |
| EER88999 | Sorghum | nucleus | 59.51 | 62.55 |
| EES05140 | Sorghum | nucleus | 60.26 | 61.52 |
| Os01t0183100-01 | Rice | nucleus | 60.82 | 61.05 |
| Zm00001d036359_P001 | Maize | nucleus | 57.84 | 60.9 |
| HORVU4Hr1G011790.3 | Barley | cytosol | 60.26 | 60.83 |
| TraesCS4B01G070900.1 | Wheat | cytosol | 59.51 | 60.08 |
| TraesCS4D01G069800.1 | Wheat | cytosol | 59.51 | 60.08 |
| TraesCS4A01G244000.2 | Wheat | nucleus | 58.77 | 59.32 |
| TraesCS1D01G385600.1 | Wheat | nucleus | 57.84 | 58.82 |
| HORVU2Hr1G046230.4 | Barley | cytosol | 10.82 | 58.59 |
| TraesCS1B01G399700.1 | Wheat | nucleus | 58.02 | 58.24 |
| HORVU2Hr1G124260.1 | Barley | plastid | 59.51 | 55.19 |
| HORVU4Hr1G011830.1 | Barley | cytosol, mitochondrion, nucleus | 9.33 | 53.19 |
| HORVU7Hr1G050690.1 | Barley | cytosol, extracellular, nucleus | 3.17 | 36.96 |
| HORVU6Hr1G037120.1 | Barley | cytosol, nucleus, plastid | 5.04 | 36.49 |
| HORVU6Hr1G016260.1 | Barley | cytosol | 4.85 | 35.14 |
| HORVU5Hr1G075250.1 | Barley | cytosol | 2.99 | 34.78 |
| HORVU7Hr1G043570.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 4.66 | 33.78 |
Protein Annotations
| MapMan:17.1.3.2.1.11 | Gene3D:2.130.10.10 | EntrezGene:820218 | UniProt:A0A178VDI7 | ProteinID:AAF76355.1 | ProteinID:AEE74922.1 |
| ArrayExpress:AT3G10530 | EnsemblPlantsGene:AT3G10530 | RefSeq:AT3G10530 | TAIR:AT3G10530 | RefSeq:AT3G10530-TAIR-G | EnsemblPlants:AT3G10530.1 |
| TAIR:AT3G10530.1 | Unigene:At.39914 | InterPro:BING4_C_dom | EMBL:BT004313 | EMBL:BT006135 | GO:GO:0000462 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0030686 | GO:GO:0032040 | GO:GO:0080008 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| RefSeq:NP_187664.2 | ProteinID:OAP03435.1 | PFAM:PD023243 | PFAM:PF00400 | PFAM:PF08149 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR14085 | UniProt:Q9LPP3 | SMART:SM00320 | SMART:SM01033 |
| SUPFAM:SSF50978 | UniParc:UPI000000C336 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
F18K10.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPP3]
Coordinates
chr3:+:3285832..3288880
Molecular Weight (calculated)
60264.6 Da
IEP (calculated)
10.137
GRAVY (calculated)
-0.617
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: MEISSEDNNL MEKVLPPVEQ ESDVELETKV KKYLRGEGAN LETLKDKKLK TQLASREKLY GKSAKAAAKI EKWLLPAEAG YLETEGLEKT WRVKQTDIAN
101: EVDILSSRNQ YDIVLPDFGP YKLDFTASGR HMLAGGRKGH LALLDMMNMS LIKEIQVRET VRDVAFLHND QFFAAAQKKY AYIYGRDGTE LHCLKERGPV
201: ARLRFLKNHF LLASVNMSGQ LHYQDVTHGG MVASIRTGKG RTDVMEVNPY NSVVGLGHSG GTVTMWKPTS QAPLVQMQCH PGPVSSVAFH PNGHLMATSG
301: KERKIKIWDL RKFEEVQTIH SFHAKTLSFS QKGLLAAGTG SFVQILGDSS GGSSHNYTRY MNHSMVKGYQ IEKVMFRPYE DVIGIGHSMG WSSILIPGSG
401: EPNFDSWVAN PFETSKQRRE KEVHSLLDKL PPETIMLDPS KIGAMRPSRR KEKPSRGEIE AEKEVAIEAA KSTELKNKTK GRNKPSKRTK KKKEMVENAK
501: RTFPEQEHNT AIKKRRIVED AAAELPTSLK RFARKN
101: EVDILSSRNQ YDIVLPDFGP YKLDFTASGR HMLAGGRKGH LALLDMMNMS LIKEIQVRET VRDVAFLHND QFFAAAQKKY AYIYGRDGTE LHCLKERGPV
201: ARLRFLKNHF LLASVNMSGQ LHYQDVTHGG MVASIRTGKG RTDVMEVNPY NSVVGLGHSG GTVTMWKPTS QAPLVQMQCH PGPVSSVAFH PNGHLMATSG
301: KERKIKIWDL RKFEEVQTIH SFHAKTLSFS QKGLLAAGTG SFVQILGDSS GGSSHNYTRY MNHSMVKGYQ IEKVMFRPYE DVIGIGHSMG WSSILIPGSG
401: EPNFDSWVAN PFETSKQRRE KEVHSLLDKL PPETIMLDPS KIGAMRPSRR KEKPSRGEIE AEKEVAIEAA KSTELKNKTK GRNKPSKRTK KKKEMVENAK
501: RTFPEQEHNT AIKKRRIVED AAAELPTSLK RFARKN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.