CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
vacuole 1
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99078	Soybean	cytosol	96.67	96.67
KRH74856	Soybean	cytosol	95.83	95.83
KRH70721	Soybean	cytosol	95.83	95.83
KRH40107	Soybean	endoplasmic reticulum	95.0	95.0
KRH01164	Soybean	cytosol	95.0	95.0
GSMUA_Achr6P14630_001	Banana	plasma membrane	91.67	91.67
GSMUA_Achr3P20070_001	Banana	cytosol, mitochondrion	90.83	90.83
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	90.83	90.83
TraesCS7A01G300500.1	Wheat	golgi, unclear	90.0	90.76
TraesCS2D01G323900.1	Wheat	unclear	90.0	90.76
TraesCS2B01G342800.1	Wheat	cytosol	90.0	90.76
TraesCS2A01G339200.1	Wheat	cytosol	90.0	90.76
GSMUA_Achr8P17000_001	Banana	cytosol	90.0	90.0
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	90.0	90.0
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	90.0	90.0
TraesCS5D01G239800.1	Wheat	cytosol	89.17	89.92
TraesCS5B01G226600.1	Wheat	golgi, plastid, unclear	89.17	89.92
HORVU7Hr1G071240.1	Barley	cytosol	89.17	89.92
TraesCS5A01G227800.1	Wheat	cytosol	89.17	89.92
TraesCS7B01G201400.1	Wheat	cytosol	89.17	89.92
TraesCS7D01G296300.1	Wheat	cytosol	89.17	89.92
Zm00001d032181_P001	Maize	mitochondrion	89.17	89.92
EES15047	Sorghum	cytosol	89.17	89.92
Zm00001d050411_P001	Maize	cytosol	89.17	89.92
Os08t0156800-01	Rice	nucleus	88.33	89.83
Os08t0436800-01	Rice	plastid	88.33	89.83
GSMUA_Achr7P18110_001	Banana	cytosol	88.33	88.33
EER98897	Sorghum	cytosol, mitochondrion	87.5	88.24
Zm00001d024571_P001	Maize	cytosol	87.5	88.24
EES13382	Sorghum	cytosol	87.5	88.24
Zm00001d020450_P001	Maize	plastid	87.5	87.5
GSMUA_Achr11P...	Banana	cytosol	86.67	86.67
Zm00001d049552_P007	Maize	cytosol	87.5	78.95
Os09t0413500-01	Rice	plastid	40.0	77.42
HORVU2Hr1G080340.2	Barley	mitochondrion	71.67	58.9
Zm00001d038662_P001	Maize	cytosol, mitochondrion	43.33	56.52
Zm00001d007386_P001	Maize	plastid	42.5	35.92

Protein Annotations

MapMan:17.1.2.1.34	Gene3D:3.40.1800.40	EMBL:ACUP02005295	EnsemblPlantsGene:GLYMA_08G301300	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0022625	GO:GO:0042254
UniProt:I1KXU2	InterPro:IPR038562	EnsemblPlants:KRH45923	ProteinID:KRH45923	ProteinID:KRH45923.1	PFAM:PF01199
PRINTS:PR01250	ScanProsite:PS01145	PANTHER:PTHR10759	PANTHER:PTHR10759:SF30	InterPro:Ribosomal_L34Ae	InterPro:Ribosomal_L34Ae_sf
InterPro:Ribosomal_L34e_CS	UniParc:UPI00023CA89E	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:41930970..41932685

Molecular Weight (calculated)

13792.2 Da

IEP (calculated)

12.060

GRAVY (calculated)

-0.908

Length

120 amino acids

Sequence
(BLAST)

001: MVQRLTYRKR HSYATKSNQH RVVKTPGGKL VYQTTKKRAS GPKCPVTGKR IQGIPHLRPT EYKRSRLPKN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKIQ KTKEKQALKG

Best Arabidopsis Sequence Match ( AT1G26880.1 )
(BLAST)

001: MVQRLVYRSR HSYATKSNQH RIVKTPGGKL VYQTTKKRAS GPKCPVTGKR IQGIPHLRPS EYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKLQ KAKEKVAPKA

Arabidopsis Description

RPL34A60S ribosomal protein L34-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42351]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.