CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024571_P001	Maize	cytosol	98.32	98.32
Os08t0156800-01	Rice	nucleus	97.48	98.31
EER98897	Sorghum	cytosol, mitochondrion	96.64	96.64
TraesCS7D01G296300.1	Wheat	cytosol	95.8	95.8
TraesCS7B01G201400.1	Wheat	cytosol	95.8	95.8
HORVU7Hr1G071240.1	Barley	cytosol	95.8	95.8
EES15047	Sorghum	cytosol	95.8	95.8
TraesCS7A01G300500.1	Wheat	golgi, unclear	94.96	94.96
GSMUA_Achr8P17000_001	Banana	cytosol	92.44	91.67
GSMUA_Achr6P14630_001	Banana	plasma membrane	92.44	91.67
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	92.44	91.67
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	92.44	91.67
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	91.6	90.83
GSMUA_Achr3P20070_001	Banana	cytosol, mitochondrion	90.76	90.0
GSMUA_Achr7P18110_001	Banana	cytosol	90.76	90.0
KRH40107	Soybean	endoplasmic reticulum	89.92	89.17
KRH01164	Soybean	cytosol	89.92	89.17
KRH70721	Soybean	cytosol	89.08	88.33
KRG99078	Soybean	cytosol	89.08	88.33
KRH74856	Soybean	cytosol	89.08	88.33
Solyc05g007560.2.1	Tomato	nucleus	89.08	88.33
VIT_01s0026g02410.t01	Wine grape	cytosol	89.08	88.33
KRH45923	Soybean	cytosol	88.24	87.5
Solyc02g087930.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	88.24	87.5
Solyc06g069860.2.1	Tomato	nucleus	88.24	87.5
PGSC0003DMT400003592	Potato	cytosol	87.39	86.67
PGSC0003DMT400080291	Potato	cytosol	87.39	86.67
Zm00001d049552_P007	Maize	cytosol	96.64	86.47
GSMUA_Achr11P...	Banana	cytosol	86.55	85.83
AT1G26880.1	Thale cress	cytosol, mitochondrion, plastid	85.71	85.0
AT1G69620.1	Thale cress	cytosol	84.87	84.87
CDY01759	Canola	cytosol, mitochondrion, plastid	84.03	83.33
CDX95913	Canola	cytosol, mitochondrion, plastid	84.03	83.33
CDY68374	Canola	cytosol, mitochondrion, plastid	83.19	82.5
Bra003991.1-P	Field mustard	cytosol, mitochondrion, plastid	83.19	82.5
Bra007871.1-P	Field mustard	cytosol, mitochondrion, plastid	83.19	82.5
Bra016295.1-P	Field mustard	cytosol	83.19	82.5
Bra039041.1-P	Field mustard	cytosol, mitochondrion, plastid	83.19	82.5
CDY00108	Canola	extracellular	83.19	82.5
CDY04284	Canola	cytosol, mitochondrion, plastid	83.19	82.5
CDY07341	Canola	extracellular	83.19	82.5
CDY20010	Canola	cytosol, mitochondrion, plastid	83.19	82.5
CDY44081	Canola	cytosol, mitochondrion, plastid	83.19	82.5
CDY46432	Canola	cytosol	83.19	82.5
CDY65271	Canola	cytosol	83.19	82.5
AT3G28900.1	Thale cress	cytosol	82.35	81.67
PGSC0003DMT400083150	Potato	cytosol	70.59	78.5
VIT_14s0108g00850.t01	Wine grape	cytosol	75.63	64.29
Bra004400.1-P	Field mustard	cytosol, mitochondrion, plastid	83.19	40.91

Protein Annotations

MapMan:17.1.2.1.34	Gene3D:3.40.1800.40	EntrezGene:8076595	UniProt:C5YH02	EnsemblPlants:EES13382	ProteinID:EES13382
ProteinID:EES13382.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	GO:GO:0022625	GO:GO:0042254	InterPro:IPR038562	PFAM:PF01199	PRINTS:PR01250
ScanProsite:PS01145	PANTHER:PTHR10759	PANTHER:PTHR10759:SF18	InterPro:Ribosomal_L34Ae	InterPro:Ribosomal_L34Ae_sf	InterPro:Ribosomal_L34e_CS
EnsemblPlantsGene:SORBI_3007G045700	unigene:Sbi.5630	UniParc:UPI0001A87424	RefSeq:XP_002443887.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:4597990..4601513

Molecular Weight (calculated)

13708.0 Da

IEP (calculated)

12.026

GRAVY (calculated)

-0.918

Length

119 amino acids

Sequence
(BLAST)

001: MVQRLTYRKR HSYATKSNQT RVVKTPGGRL VYQYTKKRAS GPKCPVTGKK IQGIPHLRPA EYKRSRLSRN RRTVNRPYGG VLSGTAVRER IIRAFLVEEQ
101: KIVKKVLKIQ KTKDKASKS

Best Arabidopsis Sequence Match ( AT1G26880.1 )
(BLAST)

001: MVQRLVYRSR HSYATKSNQH RIVKTPGGKL VYQTTKKRAS GPKCPVTGKR IQGIPHLRPS EYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKLQ KAKEKVAPKA

Arabidopsis Description

RPL34A60S ribosomal protein L34-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42351]
SUBAcon: [cytosol,plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.