CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
vacuole 1
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70721	Soybean	cytosol	100.0	100.0
KRH40107	Soybean	endoplasmic reticulum	98.33	98.33
KRH01164	Soybean	cytosol	98.33	98.33
KRH45923	Soybean	cytosol	95.83	95.83
KRG99078	Soybean	cytosol	95.83	95.83
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	94.17	94.17
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	93.33	93.33
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	93.33	93.33
GSMUA_Achr6P14630_001	Banana	plasma membrane	93.33	93.33
GSMUA_Achr3P20070_001	Banana	cytosol, mitochondrion	92.5	92.5
GSMUA_Achr8P17000_001	Banana	cytosol	92.5	92.5
GSMUA_Achr7P18110_001	Banana	cytosol	91.67	91.67
TraesCS2A01G339200.1	Wheat	cytosol	90.0	90.76
TraesCS2B01G342800.1	Wheat	cytosol	90.0	90.76
TraesCS2D01G323900.1	Wheat	unclear	90.0	90.76
Zm00001d032181_P001	Maize	mitochondrion	90.0	90.76
EES15047	Sorghum	cytosol	90.0	90.76
Zm00001d050411_P001	Maize	cytosol	90.0	90.76
Os08t0156800-01	Rice	nucleus	89.17	90.68
Os08t0436800-01	Rice	plastid	89.17	90.68
GSMUA_Achr11P...	Banana	cytosol	90.0	90.0
EER98897	Sorghum	cytosol, mitochondrion	89.17	89.92
TraesCS5A01G227800.1	Wheat	cytosol	89.17	89.92
TraesCS5B01G226600.1	Wheat	golgi, plastid, unclear	89.17	89.92
TraesCS5D01G239800.1	Wheat	cytosol	89.17	89.92
TraesCS7A01G300500.1	Wheat	golgi, unclear	89.17	89.92
Zm00001d020450_P001	Maize	plastid	89.17	89.17
TraesCS7B01G201400.1	Wheat	cytosol	88.33	89.08
EES13382	Sorghum	cytosol	88.33	89.08
Zm00001d024571_P001	Maize	cytosol	88.33	89.08
TraesCS7D01G296300.1	Wheat	cytosol	88.33	89.08
HORVU7Hr1G071240.1	Barley	cytosol	88.33	89.08
Zm00001d049552_P007	Maize	cytosol	89.17	80.45
Os09t0413500-01	Rice	plastid	40.83	79.03
HORVU2Hr1G080340.2	Barley	mitochondrion	71.67	58.9
Zm00001d038662_P001	Maize	cytosol, mitochondrion	44.17	57.61
Zm00001d007386_P001	Maize	plastid	42.5	35.92

Protein Annotations

EntrezGene:100779148	MapMan:17.1.2.1.34	Gene3D:3.40.1800.40	EMBL:ACUP02000081	EMBL:ACUP02000791	EnsemblPlantsGene:GLYMA_01G047000
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0022625	GO:GO:0042254	UniProt:I1J5Q7	InterPro:IPR038562	ProteinID:KRH70721.1	EnsemblPlants:KRH74856
ProteinID:KRH74856	ProteinID:KRH74856.1	PFAM:PF01199	PRINTS:PR01250	ScanProsite:PS01145	PANTHER:PTHR10759
PANTHER:PTHR10759:SF30	InterPro:Ribosomal_L34Ae	InterPro:Ribosomal_L34Ae_sf	InterPro:Ribosomal_L34e_CS	UniParc:UPI0001BA868E	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:5484606..5486622

Molecular Weight (calculated)

13748.1 Da

IEP (calculated)

12.132

GRAVY (calculated)

-0.892

Length

120 amino acids

Sequence
(BLAST)

001: MVQRLTYRKR HSYATKSNQH RVVKTPGGKL VYQTTKKRAS GPKCPVTGKR IQGIPHLRPA EYKRSRLPRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKIQ KAKEKQASKA

Best Arabidopsis Sequence Match ( AT1G26880.1 )
(BLAST)

001: MVQRLVYRSR HSYATKSNQH RIVKTPGGKL VYQTTKKRAS GPKCPVTGKR IQGIPHLRPS EYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKLQ KAKEKVAPKA

Arabidopsis Description

RPL34A60S ribosomal protein L34-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42351]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.