Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G323900.1 | Wheat | unclear | 100.0 | 100.0 |
| TraesCS2B01G342800.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS7A01G300500.1 | Wheat | golgi, unclear | 95.8 | 95.8 |
| TraesCS5A01G227800.1 | Wheat | cytosol | 95.8 | 95.8 |
| GSMUA_Achr6P14630_001 | Banana | plasma membrane | 94.96 | 94.17 |
| GSMUA_Achr3P20070_001 | Banana | cytosol, mitochondrion | 93.28 | 92.5 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 93.28 | 92.5 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 93.28 | 92.5 |
| GSMUA_Achr8P17000_001 | Banana | cytosol | 92.44 | 91.67 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 92.44 | 91.67 |
| GSMUA_Achr7P18110_001 | Banana | cytosol | 91.6 | 90.83 |
| KRH70721 | Soybean | cytosol | 90.76 | 90.0 |
| KRH01164 | Soybean | cytosol | 90.76 | 90.0 |
| KRH40107 | Soybean | endoplasmic reticulum | 90.76 | 90.0 |
| KRH45923 | Soybean | cytosol | 90.76 | 90.0 |
| KRH74856 | Soybean | cytosol | 90.76 | 90.0 |
| KRG99078 | Soybean | cytosol | 89.92 | 89.17 |
| VIT_01s0026g02410.t01 | Wine grape | cytosol | 89.92 | 89.17 |
| Solyc05g007560.2.1 | Tomato | nucleus | 89.08 | 88.33 |
| PGSC0003DMT400003592 | Potato | cytosol | 88.24 | 87.5 |
| PGSC0003DMT400080291 | Potato | cytosol | 88.24 | 87.5 |
| Solyc02g087930.2.1 | Tomato | endoplasmic reticulum, nucleus, unclear | 88.24 | 87.5 |
| GSMUA_Achr11P... | Banana | cytosol | 87.39 | 86.67 |
| Solyc06g069860.2.1 | Tomato | nucleus | 87.39 | 86.67 |
| AT1G69620.1 | Thale cress | cytosol | 86.55 | 86.55 |
| AT1G26880.1 | Thale cress | cytosol, mitochondrion, plastid | 86.55 | 85.83 |
| CDY65271 | Canola | cytosol | 84.87 | 84.17 |
| CDY46432 | Canola | cytosol | 84.87 | 84.17 |
| Bra016295.1-P | Field mustard | cytosol | 84.87 | 84.17 |
| CDY01759 | Canola | cytosol, mitochondrion, plastid | 84.03 | 83.33 |
| CDX95913 | Canola | cytosol, mitochondrion, plastid | 84.03 | 83.33 |
| CDY68374 | Canola | cytosol, mitochondrion, plastid | 83.19 | 82.5 |
| Bra003991.1-P | Field mustard | cytosol, mitochondrion, plastid | 83.19 | 82.5 |
| Bra007871.1-P | Field mustard | cytosol, mitochondrion, plastid | 83.19 | 82.5 |
| Bra039041.1-P | Field mustard | cytosol, mitochondrion, plastid | 83.19 | 82.5 |
| CDY00108 | Canola | extracellular | 83.19 | 82.5 |
| CDY04284 | Canola | cytosol, mitochondrion, plastid | 83.19 | 82.5 |
| CDY07341 | Canola | extracellular | 83.19 | 82.5 |
| CDY20010 | Canola | cytosol, mitochondrion, plastid | 83.19 | 82.5 |
| CDY44081 | Canola | cytosol, mitochondrion, plastid | 83.19 | 82.5 |
| AT3G28900.1 | Thale cress | cytosol | 82.35 | 81.67 |
| PGSC0003DMT400083150 | Potato | cytosol | 69.75 | 77.57 |
| HORVU2Hr1G080340.2 | Barley | mitochondrion | 80.67 | 65.75 |
| VIT_14s0108g00850.t01 | Wine grape | cytosol | 73.11 | 62.14 |
| Bra004400.1-P | Field mustard | cytosol, mitochondrion, plastid | 83.19 | 40.91 |
Protein Annotations
| MapMan:17.1.2.1.34 | Gene3D:3.40.1800.40 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR038562 | PFAM:PF01199 |
| PRINTS:PR01250 | ScanProsite:PS01145 | PANTHER:PTHR10759 | PANTHER:PTHR10759:SF18 | InterPro:Ribosomal_L34Ae | InterPro:Ribosomal_L34Ae_sf |
| InterPro:Ribosomal_L34e_CS | EnsemblPlantsGene:TraesCS2A01G339200 | EnsemblPlants:TraesCS2A01G339200.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2A:-:573336227..573337690
Molecular Weight (calculated)
13846.2 Da
IEP (calculated)
12.026
GRAVY (calculated)
-1.013
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQRLTYRKR HSYATKSNQT RVVKTPGGRL VYQYTKKRAS GPKCPVTGKK IQGIPHLRPT EYKRSRLSRN RRTVNRPYGG VLSGQAVRER IIRAFLVEEQ
101: KIVKKVLKIQ KTKEKQPSK
101: KIVKKVLKIQ KTKEKQPSK
001: MVQRLVYRSR HSYATKSNQH RIVKTPGGKL VYQTTKKRAS GPKCPVTGKR IQGIPHLRPS EYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKLQ KAKEKVAPKA
101: KIVKKVLKLQ KAKEKVAPKA
Arabidopsis Description
RPL34A60S ribosomal protein L34-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42351]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.