Factsheet for AT1G69620.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G26880.1	Thale cress	cytosol, mitochondrion, plastid	98.32	97.5
CDX95913	Canola	cytosol, mitochondrion, plastid	96.64	95.83
CDY01759	Canola	cytosol, mitochondrion, plastid	96.64	95.83
Bra003991.1-P	Field mustard	cytosol, mitochondrion, plastid	95.8	95.0
Bra007871.1-P	Field mustard	cytosol, mitochondrion, plastid	95.8	95.0
CDY04284	Canola	cytosol, mitochondrion, plastid	95.8	95.0
CDY07341	Canola	extracellular	95.8	95.0
CDY44081	Canola	cytosol, mitochondrion, plastid	95.8	95.0
CDY68374	Canola	cytosol, mitochondrion, plastid	94.96	94.17
AT3G28900.1	Thale cress	cytosol	94.12	93.33
KRH01164	Soybean	cytosol	89.92	89.17
KRH40107	Soybean	endoplasmic reticulum	89.92	89.17
GSMUA_Achr6P14630_001	Banana	plasma membrane	89.92	89.17
Solyc06g069860.2.1	Tomato	nucleus	89.08	88.33
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	89.08	88.33
GSMUA_Achr3P20070_001	Banana	cytosol, mitochondrion	89.08	88.33
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	88.24	87.5
GSMUA_Achr8P17000_001	Banana	cytosol	88.24	87.5
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	88.24	87.5
TraesCS7A01G300500.1	Wheat	golgi, unclear	87.39	87.39
TraesCS2D01G323900.1	Wheat	unclear	86.55	86.55
Zm00001d050411_P001	Maize	cytosol	86.55	86.55
TraesCS7D01G296300.1	Wheat	cytosol	86.55	86.55
TraesCS7B01G201400.1	Wheat	cytosol	86.55	86.55
TraesCS5D01G239800.1	Wheat	cytosol	86.55	86.55
TraesCS5B01G226600.1	Wheat	golgi, plastid, unclear	86.55	86.55
TraesCS5A01G227800.1	Wheat	cytosol	86.55	86.55
TraesCS2B01G342800.1	Wheat	cytosol	86.55	86.55
TraesCS2A01G339200.1	Wheat	cytosol	86.55	86.55
EES15047	Sorghum	cytosol	86.55	86.55
EER98897	Sorghum	cytosol, mitochondrion	86.55	86.55
HORVU7Hr1G071240.1	Barley	cytosol	86.55	86.55
Os08t0436800-01	Rice	plastid	85.71	86.44
Os08t0156800-01	Rice	nucleus	85.71	86.44
GSMUA_Achr7P18110_001	Banana	cytosol	86.55	85.83
Zm00001d020450_P001	Maize	plastid	86.55	85.83
EES13382	Sorghum	cytosol	84.87	84.87
Zm00001d032181_P001	Maize	mitochondrion	84.87	84.87
Zm00001d024571_P001	Maize	cytosol	84.03	84.03
GSMUA_Achr11P...	Banana	cytosol	84.03	83.33
PGSC0003DMT400083150	Potato	cytosol	71.43	79.44
Os09t0413500-01	Rice	plastid	40.34	77.42
Zm00001d049552_P007	Maize	cytosol	84.03	75.19
VIT_14s0108g00850.t01	Wine grape	cytosol	73.11	62.14
HORVU2Hr1G080340.2	Barley	mitochondrion	70.59	57.53
Zm00001d038662_P001	Maize	cytosol, mitochondrion	41.18	53.26
Bra004400.1-P	Field mustard	cytosol, mitochondrion, plastid	93.28	45.87
Zm00001d007386_P001	Maize	plastid	39.5	33.1

Protein Annotations

MapMan:17.1.2.1.34	Gene3D:3.40.1800.40	EntrezGene:843298	UniProt:A0A178W6Y8	ProteinID:AAG12705.1	ProteinID:AAG52537.1
ProteinID:AEE34956.1	EMBL:AF324703	EMBL:AF327531	EMBL:AF349526	EMBL:AF446885	ArrayExpress:AT1G69620
EnsemblPlantsGene:AT1G69620	RefSeq:AT1G69620	TAIR:AT1G69620	RefSeq:AT1G69620-TAIR-G	EnsemblPlants:AT1G69620.1	TAIR:AT1G69620.1
EMBL:AY052720	EMBL:AY085544	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003729
GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0019538
GO:GO:0022625	GO:GO:0030529	GO:GO:0042254	InterPro:IPR038562	RefSeq:NP_177120.1	ProteinID:OAP14250.1
PFAM:PF01199	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PRINTS:PR01250	ScanProsite:PS01145	PANTHER:PTHR10759	PANTHER:PTHR10759:SF30
UniProt:Q9FE65	Symbol:RPL34	InterPro:Ribosomal_L34Ae	InterPro:Ribosomal_L34Ae_sf	InterPro:Ribosomal_L34e_CS	UniParc:UPI00000AB0AB
SEG:seg	:	:	:	:	:

Description

RPL34B60S ribosomal protein L34-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE65]

Coordinates

chr1:+:26189775..26191404

Molecular Weight (calculated)

13650.9 Da

IEP (calculated)

12.128

GRAVY (calculated)

-0.848

Length

119 amino acids

Sequence
(BLAST)

001: MVQRLVYRSR HSYATKSNQH RIVKTPGGKL TYQTTKKRAS GPKCPVTGKR IQGIPHLRPT EYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKLQ KAKEKVAPK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.