Factsheet for HORVU7Hr1G071240.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G296300.1	Wheat	cytosol	100.0	100.0
TraesCS7B01G201400.1	Wheat	cytosol	100.0	100.0
TraesCS7A01G300500.1	Wheat	golgi, unclear	99.16	99.16
EES13382	Sorghum	cytosol	95.8	95.8
Os08t0156800-01	Rice	nucleus	94.96	95.76
Zm00001d024571_P001	Maize	cytosol	94.12	94.12
GSMUA_Achr6P14630_001	Banana	plasma membrane	94.12	93.33
GSMUA_Achr8P17000_001	Banana	cytosol	92.44	91.67
GSMUA_Achr3P20070_001	Banana	cytosol, mitochondrion	92.44	91.67
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	92.44	91.67
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	92.44	91.67
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	91.6	90.83
GSMUA_Achr7P18110_001	Banana	cytosol	90.76	90.0
KRH45923	Soybean	cytosol	89.92	89.17
KRH40107	Soybean	endoplasmic reticulum	89.92	89.17
KRH01164	Soybean	cytosol	89.92	89.17
KRH74856	Soybean	cytosol	89.08	88.33
KRH70721	Soybean	cytosol	89.08	88.33
KRG99078	Soybean	cytosol	89.08	88.33
Solyc05g007560.2.1	Tomato	nucleus	89.08	88.33
VIT_01s0026g02410.t01	Wine grape	cytosol	89.08	88.33
Solyc02g087930.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	88.24	87.5
Solyc06g069860.2.1	Tomato	nucleus	88.24	87.5
PGSC0003DMT400003592	Potato	cytosol	87.39	86.67
PGSC0003DMT400080291	Potato	cytosol	87.39	86.67
AT1G69620.1	Thale cress	cytosol	86.55	86.55
AT1G26880.1	Thale cress	cytosol, mitochondrion, plastid	86.55	85.83
GSMUA_Achr11P...	Banana	cytosol	86.55	85.83
CDY65271	Canola	cytosol	84.87	84.17
CDY46432	Canola	cytosol	84.87	84.17
Bra016295.1-P	Field mustard	cytosol	84.87	84.17
Zm00001d049552_P007	Maize	cytosol	93.28	83.46
CDY01759	Canola	cytosol, mitochondrion, plastid	84.03	83.33
Bra039041.1-P	Field mustard	cytosol, mitochondrion, plastid	84.03	83.33
CDX95913	Canola	cytosol, mitochondrion, plastid	84.03	83.33
CDY00108	Canola	extracellular	84.03	83.33
CDY20010	Canola	cytosol, mitochondrion, plastid	84.03	83.33
CDY04284	Canola	cytosol, mitochondrion, plastid	83.19	82.5
CDY07341	Canola	extracellular	83.19	82.5
CDY44081	Canola	cytosol, mitochondrion, plastid	83.19	82.5
Bra007871.1-P	Field mustard	cytosol, mitochondrion, plastid	83.19	82.5
CDY68374	Canola	cytosol, mitochondrion, plastid	83.19	82.5
Bra003991.1-P	Field mustard	cytosol, mitochondrion, plastid	83.19	82.5
AT3G28900.1	Thale cress	cytosol	83.19	82.5
PGSC0003DMT400083150	Potato	cytosol	69.75	77.57
HORVU2Hr1G080340.2	Barley	mitochondrion	77.31	63.01
VIT_14s0108g00850.t01	Wine grape	cytosol	73.11	62.14
Bra004400.1-P	Field mustard	cytosol, mitochondrion, plastid	83.19	40.91

Protein Annotations

MapMan:17.1.2.1.34	Gene3D:3.40.1800.40	UniProt:A0A287WTF4	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G071240
EnsemblPlants:HORVU7Hr1G071240.1	InterPro:IPR038562	PFAM:PF01199	PRINTS:PR01250	ScanProsite:PS01145	PANTHER:PTHR10759
PANTHER:PTHR10759:SF18	InterPro:Ribosomal_L34Ae	InterPro:Ribosomal_L34Ae_sf	InterPro:Ribosomal_L34e_CS	UniParc:UPI00016FB0C7	SEG:seg

Description

No Description!

Coordinates

chrchr7H:-:389885159..389888427

Molecular Weight (calculated)

13792.1 Da

IEP (calculated)

12.026

GRAVY (calculated)

-0.966

Length

119 amino acids

Sequence
(BLAST)

001: MVQRLTYRKR HSYATKSNQT RVVKTPGGRL VYQYTKKRAS GPKCPVTGKK IQGIPHLRPT EYKRSRLSRN RRTVNRPYGG VLSGPAVRER IIRAFLVEEQ
101: KIVKKVLKIQ KTKEKTTKS

Best Arabidopsis Sequence Match ( AT1G26880.1 )
(BLAST)

001: MVQRLVYRSR HSYATKSNQH RIVKTPGGKL VYQTTKKRAS GPKCPVTGKR IQGIPHLRPS EYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKLQ KAKEKVAPKA

Arabidopsis Description

RPL34A60S ribosomal protein L34-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42351]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.