Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024571_P001 | Maize | cytosol | 86.47 | 96.64 |
| EES13382 | Sorghum | cytosol | 86.47 | 96.64 |
| Zm00001d020450_P001 | Maize | plastid | 85.71 | 95.0 |
| Zm00001d050411_P001 | Maize | cytosol | 84.96 | 94.96 |
| Zm00001d032181_P001 | Maize | mitochondrion | 84.21 | 94.12 |
| TraesCS7A01G300500.1 | Wheat | golgi, unclear | 84.21 | 94.12 |
| TraesCS7D01G296300.1 | Wheat | cytosol | 83.46 | 93.28 |
| TraesCS7B01G201400.1 | Wheat | cytosol | 83.46 | 93.28 |
| HORVU7Hr1G071240.1 | Barley | cytosol | 83.46 | 93.28 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 82.71 | 91.67 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 81.95 | 90.83 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 81.2 | 90.0 |
| GSMUA_Achr6P14630_001 | Banana | plasma membrane | 81.2 | 90.0 |
| KRH01164 | Soybean | cytosol | 81.2 | 90.0 |
| KRH40107 | Soybean | endoplasmic reticulum | 81.2 | 90.0 |
| KRH70721 | Soybean | cytosol | 80.45 | 89.17 |
| GSMUA_Achr3P20070_001 | Banana | cytosol, mitochondrion | 80.45 | 89.17 |
| GSMUA_Achr11P... | Banana | cytosol | 80.45 | 89.17 |
| KRH74856 | Soybean | cytosol | 80.45 | 89.17 |
| VIT_01s0026g02410.t01 | Wine grape | cytosol | 80.45 | 89.17 |
| GSMUA_Achr8P17000_001 | Banana | cytosol | 80.45 | 89.17 |
| Solyc05g007560.2.1 | Tomato | nucleus | 79.7 | 88.33 |
| Solyc02g087930.2.1 | Tomato | endoplasmic reticulum, nucleus, unclear | 79.7 | 88.33 |
| GSMUA_Achr7P18110_001 | Banana | cytosol | 79.7 | 88.33 |
| KRG99078 | Soybean | cytosol | 79.7 | 88.33 |
| PGSC0003DMT400080291 | Potato | cytosol | 78.95 | 87.5 |
| PGSC0003DMT400003592 | Potato | cytosol | 78.95 | 87.5 |
| KRH45923 | Soybean | cytosol | 78.95 | 87.5 |
| Solyc06g069860.2.1 | Tomato | nucleus | 78.2 | 86.67 |
| AT1G26880.1 | Thale cress | cytosol, mitochondrion, plastid | 75.94 | 84.17 |
| AT1G69620.1 | Thale cress | cytosol | 75.19 | 84.03 |
| AT3G28900.1 | Thale cress | cytosol | 75.19 | 83.33 |
| CDY01759 | Canola | cytosol, mitochondrion, plastid | 74.44 | 82.5 |
| CDX95913 | Canola | cytosol, mitochondrion, plastid | 74.44 | 82.5 |
| Bra039041.1-P | Field mustard | cytosol, mitochondrion, plastid | 73.68 | 81.67 |
| Bra016295.1-P | Field mustard | cytosol | 73.68 | 81.67 |
| Bra007871.1-P | Field mustard | cytosol, mitochondrion, plastid | 73.68 | 81.67 |
| Bra003991.1-P | Field mustard | cytosol, mitochondrion, plastid | 73.68 | 81.67 |
| CDY65271 | Canola | cytosol | 73.68 | 81.67 |
| CDY00108 | Canola | extracellular | 73.68 | 81.67 |
| CDY04284 | Canola | cytosol, mitochondrion, plastid | 73.68 | 81.67 |
| CDY07341 | Canola | extracellular | 73.68 | 81.67 |
| CDY20010 | Canola | cytosol, mitochondrion, plastid | 73.68 | 81.67 |
| CDY44081 | Canola | cytosol, mitochondrion, plastid | 73.68 | 81.67 |
| CDY46432 | Canola | cytosol | 73.68 | 81.67 |
| CDY68374 | Canola | cytosol, mitochondrion, plastid | 73.68 | 81.67 |
| PGSC0003DMT400083150 | Potato | cytosol | 62.41 | 77.57 |
| VIT_14s0108g00850.t01 | Wine grape | cytosol | 66.92 | 63.57 |
| Zm00001d038662_P001 | Maize | cytosol, mitochondrion | 42.86 | 61.96 |
| Bra004400.1-P | Field mustard | cytosol, mitochondrion, plastid | 73.68 | 40.5 |
| Zm00001d007386_P001 | Maize | plastid | 41.35 | 38.73 |
Protein Annotations
| MapMan:17.1.2.1.34 | Gene3D:3.40.1800.40 | UniProt:A0A1D6PW14 | ProteinID:AQK50758.1 | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| InterPro:IPR038562 | PFAM:PF01199 | PRINTS:PR01250 | ScanProsite:PS01145 | PANTHER:PTHR10759 | PANTHER:PTHR10759:SF18 |
| InterPro:Ribosomal_L34Ae | InterPro:Ribosomal_L34Ae_sf | InterPro:Ribosomal_L34e_CS | UniParc:UPI000843F9AB | EnsemblPlantsGene:Zm00001d049552 | EnsemblPlants:Zm00001d049552_P007 |
| EnsemblPlants:Zm00001d049552_T007 | SEG:seg | : | : | : | : |
Description
60S ribosomal protein L34-3
Coordinates
chr4:-:34381442..34384226
Molecular Weight (calculated)
15140.8 Da
IEP (calculated)
11.600
GRAVY (calculated)
-0.688
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQRLTYRKR HSYATKSNQT RVVKTPGGKL VYQYTKKRAS GPKCPVTGKK IQGVCAAHLS ILSSRYCIPH LRPAEYKRSR LARNQRTVNR PYGGVLSGTA
101: VRERIIRAFL VEEQKIVKKV LKIQKTKDKA SKS
101: VRERIIRAFL VEEQKIVKKV LKIQKTKDKA SKS
001: MVQRLVYRSR HSYATKSNQH RIVKTPGGKL VYQTTKKRAS GPKCPVTGKR IQGIPHLRPS EYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKLQ KAKEKVAPKA
101: KIVKKVLKLQ KAKEKVAPKA
Arabidopsis Description
RPL34A60S ribosomal protein L34-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42351]
SUBAcon: [mitochondrion,plastid,cytosol]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.