Factsheet for Zm00001d038662_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050411_P001	Maize	cytosol	60.87	47.06
Zm00001d032181_P001	Maize	mitochondrion	60.87	47.06
PGSC0003DMT400083150	Potato	cytosol	54.35	46.73
Zm00001d020450_P001	Maize	plastid	60.87	46.67
Os08t0156800-01	Rice	nucleus	59.78	46.61
Zm00001d024571_P001	Maize	cytosol	59.78	46.22
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	58.7	45.0
KRH70721	Soybean	cytosol	57.61	44.17
KRH01164	Soybean	cytosol	57.61	44.17
KRG99078	Soybean	cytosol	57.61	44.17
GSMUA_Achr8P17000_001	Banana	cytosol	57.61	44.17
KRH40107	Soybean	endoplasmic reticulum	57.61	44.17
GSMUA_Achr6P14630_001	Banana	plasma membrane	57.61	44.17
GSMUA_Achr3P20070_001	Banana	cytosol, mitochondrion	57.61	44.17
GSMUA_Achr11P...	Banana	cytosol	57.61	44.17
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	57.61	44.17
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	57.61	44.17
KRH74856	Soybean	cytosol	57.61	44.17
KRH45923	Soybean	cytosol	56.52	43.33
VIT_01s0026g02410.t01	Wine grape	cytosol	56.52	43.33
Zm00001d007386_P001	Maize	plastid	66.3	42.96
Zm00001d049552_P007	Maize	cytosol	61.96	42.86
GSMUA_Achr7P18110_001	Banana	cytosol	55.43	42.5
PGSC0003DMT400003592	Potato	cytosol	55.43	42.5
PGSC0003DMT400080291	Potato	cytosol	55.43	42.5
Solyc02g087930.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	55.43	42.5
Solyc05g007560.2.1	Tomato	nucleus	55.43	42.5
Solyc06g069860.2.1	Tomato	nucleus	55.43	42.5
AT1G26880.1	Thale cress	cytosol, mitochondrion, plastid	54.35	41.67
Bra039041.1-P	Field mustard	cytosol, mitochondrion, plastid	54.35	41.67
CDY00108	Canola	extracellular	54.35	41.67
CDY20010	Canola	cytosol, mitochondrion, plastid	54.35	41.67
AT1G69620.1	Thale cress	cytosol	53.26	41.18
CDY44081	Canola	cytosol, mitochondrion, plastid	53.26	40.83
CDY07341	Canola	extracellular	53.26	40.83
CDY04284	Canola	cytosol, mitochondrion, plastid	53.26	40.83
CDY01759	Canola	cytosol, mitochondrion, plastid	53.26	40.83
CDY46432	Canola	cytosol	53.26	40.83
CDX95913	Canola	cytosol, mitochondrion, plastid	53.26	40.83
CDY65271	Canola	cytosol	53.26	40.83
Bra016295.1-P	Field mustard	cytosol	53.26	40.83
Bra007871.1-P	Field mustard	cytosol, mitochondrion, plastid	53.26	40.83
Bra003991.1-P	Field mustard	cytosol, mitochondrion, plastid	53.26	40.83
CDY68374	Canola	cytosol, mitochondrion, plastid	53.26	40.83
AT3G28900.1	Thale cress	cytosol	52.17	40.0
VIT_14s0108g00850.t01	Wine grape	cytosol	55.43	36.43
Bra004400.1-P	Field mustard	cytosol, mitochondrion, plastid	53.26	20.25

Protein Annotations

MapMan:17.1.2.1.34	UniProt:A0A1D6M7Z0	ProteinID:AQK87139.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	PFAM:PF01199
PRINTS:PR01250	ScanProsite:PS01145	PANTHER:PTHR10759	PANTHER:PTHR10759:SF18	InterPro:Ribosomal_L34Ae	InterPro:Ribosomal_L34e_CS
UniParc:UPI0008437704	EnsemblPlantsGene:Zm00001d038662	EnsemblPlants:Zm00001d038662_P001	EnsemblPlants:Zm00001d038662_T001	SEG:seg	:

Description

60S ribosomal protein L34-3

Coordinates

chr6:+:162195453..162197612

Molecular Weight (calculated)

10566.2 Da

IEP (calculated)

10.869

GRAVY (calculated)

-0.470

Length

92 amino acids

Sequence
(BLAST)

1: MVWWLTYQKR HSYATKSNQT RVVKTPGGKL VYQYTKKRAS GPKCPVTGKK IQGVCVAHLS ILSFRYCVRD KKALEKKAAK KTLLCLKQHL EI

Best Arabidopsis Sequence Match ( AT1G26880.1 )
(BLAST)

001: MVQRLVYRSR HSYATKSNQH RIVKTPGGKL VYQTTKKRAS GPKCPVTGKR IQGIPHLRPS EYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKLQ KAKEKVAPKA

Arabidopsis Description

RPL34A60S ribosomal protein L34-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42351]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.