Factsheet for Zm00001d007386_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038662_P001	Maize	cytosol, mitochondrion	42.96	66.3
PGSC0003DMT400083150	Potato	cytosol	34.51	45.79
Zm00001d050411_P001	Maize	cytosol	38.03	45.38
Zm00001d032181_P001	Maize	mitochondrion	38.03	45.38
Zm00001d020450_P001	Maize	plastid	38.03	45.0
Os08t0156800-01	Rice	nucleus	37.32	44.92
Zm00001d024571_P001	Maize	cytosol	37.32	44.54
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	36.62	43.33
KRH45923	Soybean	cytosol	35.92	42.5
KRH01164	Soybean	cytosol	35.92	42.5
KRG99078	Soybean	cytosol	35.92	42.5
GSMUA_Achr8P17000_001	Banana	cytosol	35.92	42.5
KRH40107	Soybean	endoplasmic reticulum	35.92	42.5
GSMUA_Achr6P14630_001	Banana	plasma membrane	35.92	42.5
GSMUA_Achr3P20070_001	Banana	cytosol, mitochondrion	35.92	42.5
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	35.92	42.5
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	35.92	42.5
KRH70721	Soybean	cytosol	35.92	42.5
KRH74856	Soybean	cytosol	35.92	42.5
GSMUA_Achr11P...	Banana	cytosol	35.21	41.67
VIT_01s0026g02410.t01	Wine grape	cytosol	35.21	41.67
Zm00001d049552_P007	Maize	cytosol	38.73	41.35
GSMUA_Achr7P18110_001	Banana	cytosol	34.51	40.83
PGSC0003DMT400003592	Potato	cytosol	34.51	40.83
PGSC0003DMT400080291	Potato	cytosol	34.51	40.83
Solyc02g087930.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	34.51	40.83
Solyc05g007560.2.1	Tomato	nucleus	34.51	40.83
Solyc06g069860.2.1	Tomato	nucleus	34.51	40.83
AT1G26880.1	Thale cress	cytosol, mitochondrion, plastid	33.8	40.0
AT1G69620.1	Thale cress	cytosol	33.1	39.5
CDY00108	Canola	extracellular	33.1	39.17
Bra003991.1-P	Field mustard	cytosol, mitochondrion, plastid	33.1	39.17
Bra007871.1-P	Field mustard	cytosol, mitochondrion, plastid	33.1	39.17
Bra016295.1-P	Field mustard	cytosol	33.1	39.17
Bra039041.1-P	Field mustard	cytosol, mitochondrion, plastid	33.1	39.17
CDX95913	Canola	cytosol, mitochondrion, plastid	33.1	39.17
CDY01759	Canola	cytosol, mitochondrion, plastid	33.1	39.17
CDY04284	Canola	cytosol, mitochondrion, plastid	33.1	39.17
CDY07341	Canola	extracellular	33.1	39.17
CDY20010	Canola	cytosol, mitochondrion, plastid	33.1	39.17
CDY44081	Canola	cytosol, mitochondrion, plastid	33.1	39.17
CDY46432	Canola	cytosol	33.1	39.17
CDY65271	Canola	cytosol	33.1	39.17
CDY68374	Canola	cytosol, mitochondrion, plastid	33.1	39.17
AT3G28900.1	Thale cress	cytosol	32.39	38.33
VIT_14s0108g00850.t01	Wine grape	cytosol	35.21	35.71
Bra004400.1-P	Field mustard	cytosol, mitochondrion, plastid	33.1	19.42

Protein Annotations

EntrezGene:103648026	MapMan:17.1.2.1.34	UniProt:A0A1D6F5V4	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	ProteinID:ONM26660.1
PFAM:PF01199	PRINTS:PR01250	ScanProsite:PS01145	PANTHER:PTHR10759	PANTHER:PTHR10759:SF18	InterPro:Ribosomal_L34Ae
InterPro:Ribosomal_L34e_CS	UniParc:UPI0004DEC3A3	EnsemblPlantsGene:Zm00001d007386	EnsemblPlants:Zm00001d007386_P001	EnsemblPlants:Zm00001d007386_T001	SEG:seg

Description

60S ribosomal protein L34-3

Coordinates

chr2:-:230448468..230449205

Molecular Weight (calculated)

15508.9 Da

IEP (calculated)

11.300

GRAVY (calculated)

-0.324

Length

142 amino acids

Sequence
(BLAST)

001: MAAILPHEPP RWPRSSLSLP PRSAPPISTI PVPSPCVSAV IFPTGSSGWG QDGAAWGKMV RWLTYRKRHS YATKSNQTRV VKTPGGKLVF QYTKKRASGP
101: KCPVTGKKIQ GVCAAHLSIL SSRYCVRSLH HAPCRDFNFN AA

Best Arabidopsis Sequence Match ( AT1G26880.1 )
(BLAST)

001: MVQRLVYRSR HSYATKSNQH RIVKTPGGKL VYQTTKKRAS GPKCPVTGKR IQGIPHLRPS EYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKLQ KAKEKVAPKA

Arabidopsis Description

RPL34A60S ribosomal protein L34-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42351]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.