Factsheet for GSMUA_Achr11P10260_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	94.17	94.17
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	93.33	93.33
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	92.5	92.5
GSMUA_Achr6P14630_001	Banana	plasma membrane	92.5	92.5
GSMUA_Achr3P20070_001	Banana	cytosol, mitochondrion	91.67	91.67
GSMUA_Achr8P17000_001	Banana	cytosol	91.67	91.67
GSMUA_Achr7P18110_001	Banana	cytosol	90.83	90.83
KRH74856	Soybean	cytosol	90.0	90.0
KRH01164	Soybean	cytosol	90.0	90.0
KRH40107	Soybean	endoplasmic reticulum	90.0	90.0
KRH70721	Soybean	cytosol	90.0	90.0
VIT_01s0026g02410.t01	Wine grape	cytosol	89.17	89.17
Solyc02g087930.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	88.33	88.33
Solyc05g007560.2.1	Tomato	nucleus	88.33	88.33
Zm00001d032181_P001	Maize	mitochondrion	87.5	88.24
PGSC0003DMT400003592	Potato	cytosol	87.5	87.5
PGSC0003DMT400080291	Potato	cytosol	87.5	87.5
KRG99078	Soybean	cytosol	87.5	87.5
Zm00001d050411_P001	Maize	cytosol	86.67	87.39
TraesCS2A01G339200.1	Wheat	cytosol	86.67	87.39
TraesCS2B01G342800.1	Wheat	cytosol	86.67	87.39
TraesCS2D01G323900.1	Wheat	unclear	86.67	87.39
TraesCS7A01G300500.1	Wheat	golgi, unclear	86.67	87.39
EES15047	Sorghum	cytosol	86.67	87.39
Os08t0436800-01	Rice	plastid	85.83	87.29
Os08t0156800-01	Rice	nucleus	85.83	87.29
KRH45923	Soybean	cytosol	86.67	86.67
EES13382	Sorghum	cytosol	85.83	86.55
TraesCS5A01G227800.1	Wheat	cytosol	85.83	86.55
TraesCS5B01G226600.1	Wheat	golgi, plastid, unclear	85.83	86.55
TraesCS5D01G239800.1	Wheat	cytosol	85.83	86.55
TraesCS7B01G201400.1	Wheat	cytosol	85.83	86.55
TraesCS7D01G296300.1	Wheat	cytosol	85.83	86.55
HORVU7Hr1G071240.1	Barley	cytosol	85.83	86.55
Zm00001d024571_P001	Maize	cytosol	85.83	86.55
EER98897	Sorghum	cytosol, mitochondrion	85.83	86.55
Zm00001d020450_P001	Maize	plastid	85.83	85.83
Solyc06g069860.2.1	Tomato	nucleus	85.83	85.83
AT3G28900.1	Thale cress	cytosol	84.17	84.17
AT1G26880.1	Thale cress	cytosol, mitochondrion, plastid	84.17	84.17
AT1G69620.1	Thale cress	cytosol	83.33	84.03
Bra039041.1-P	Field mustard	cytosol, mitochondrion, plastid	82.5	82.5
CDY20010	Canola	cytosol, mitochondrion, plastid	82.5	82.5
CDY00108	Canola	extracellular	82.5	82.5
CDX95913	Canola	cytosol, mitochondrion, plastid	81.67	81.67
CDY01759	Canola	cytosol, mitochondrion, plastid	81.67	81.67
Bra003991.1-P	Field mustard	cytosol, mitochondrion, plastid	80.83	80.83
CDY68374	Canola	cytosol, mitochondrion, plastid	80.83	80.83
CDY65271	Canola	cytosol	80.83	80.83
CDY46432	Canola	cytosol	80.83	80.83
CDY44081	Canola	cytosol, mitochondrion, plastid	80.83	80.83
CDY07341	Canola	extracellular	80.83	80.83
CDY04284	Canola	cytosol, mitochondrion, plastid	80.83	80.83
Bra007871.1-P	Field mustard	cytosol, mitochondrion, plastid	80.83	80.83
Bra016295.1-P	Field mustard	cytosol	80.83	80.83
Zm00001d049552_P007	Maize	cytosol	89.17	80.45
Os09t0413500-01	Rice	plastid	38.33	74.19
PGSC0003DMT400083150	Potato	cytosol	65.83	73.83
VIT_14s0108g00850.t01	Wine grape	cytosol	70.0	60.0
Zm00001d038662_P001	Maize	cytosol, mitochondrion	44.17	57.61
HORVU2Hr1G080340.2	Barley	mitochondrion	68.33	56.16
Bra004400.1-P	Field mustard	cytosol, mitochondrion, plastid	80.0	39.67
Zm00001d007386_P001	Maize	plastid	41.67	35.21

Protein Annotations

MapMan:17.1.2.1.34	Gene3D:3.40.1800.40	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr11G10260_001	EnsemblPlants:GSMUA_Achr11P10260_001
EnsemblPlants:GSMUA_Achr11T10260_001	InterPro:IPR038562	UniProt:M0RR06	PFAM:PF01199	PRINTS:PR01250	ScanProsite:PS01145
PANTHER:PTHR10759	PANTHER:PTHR10759:SF18	InterPro:Ribosomal_L34Ae	InterPro:Ribosomal_L34Ae_sf	InterPro:Ribosomal_L34e_CS	UniParc:UPI000294F381
SEG:seg	:	:	:	:	:

Description

60S ribosomal protein L34 [Source:GMGC_GENE;Acc:GSMUA_Achr11G10260_001]

Coordinates

chr11:-:8077405..8080887

Molecular Weight (calculated)

13605.8 Da

IEP (calculated)

11.831

GRAVY (calculated)

-0.735

Length

120 amino acids

Sequence
(BLAST)

001: MVQRLTYRKR HGYATKSNQT RVVKTPGGKL VYQYTNKRAS GPICPVTGKR IQGIPHLRPA EYKRSRLARS QRTVNRAYGG VLAGSAVKER IIRAFLVEEQ
101: KIVKKVLKIQ KAKEKQASKS

Best Arabidopsis Sequence Match ( AT1G26880.1 )
(BLAST)

001: MVQRLVYRSR HSYATKSNQH RIVKTPGGKL VYQTTKKRAS GPKCPVTGKR IQGIPHLRPS EYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKLQ KAKEKVAPKA

Arabidopsis Description

RPL34A60S ribosomal protein L34-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42351]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.