Factsheet for GSMUA_Achr3P20070_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
vacuole 1
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	98.33	98.33
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	98.33	98.33
GSMUA_Achr6P14630_001	Banana	plasma membrane	98.33	98.33
GSMUA_Achr8P17000_001	Banana	cytosol	97.5	97.5
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	96.67	96.67
GSMUA_Achr7P18110_001	Banana	cytosol	96.67	96.67
TraesCS2B01G342800.1	Wheat	cytosol	92.5	93.28
TraesCS2A01G339200.1	Wheat	cytosol	92.5	93.28
TraesCS2D01G323900.1	Wheat	unclear	92.5	93.28
KRH74856	Soybean	cytosol	92.5	92.5
KRH70721	Soybean	cytosol	92.5	92.5
KRH01164	Soybean	cytosol	92.5	92.5
KRH40107	Soybean	endoplasmic reticulum	92.5	92.5
TraesCS7A01G300500.1	Wheat	golgi, unclear	91.67	92.44
TraesCS7B01G201400.1	Wheat	cytosol	91.67	92.44
TraesCS7D01G296300.1	Wheat	cytosol	91.67	92.44
HORVU7Hr1G071240.1	Barley	cytosol	91.67	92.44
VIT_01s0026g02410.t01	Wine grape	cytosol	91.67	91.67
GSMUA_Achr11P...	Banana	cytosol	91.67	91.67
Solyc05g007560.2.1	Tomato	nucleus	91.67	91.67
TraesCS5A01G227800.1	Wheat	cytosol	90.83	91.6
TraesCS5B01G226600.1	Wheat	golgi, plastid, unclear	90.83	91.6
TraesCS5D01G239800.1	Wheat	cytosol	90.83	91.6
Os08t0156800-01	Rice	nucleus	90.0	91.53
Os08t0436800-01	Rice	plastid	90.0	91.53
KRH45923	Soybean	cytosol	90.83	90.83
Solyc02g087930.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	90.83	90.83
Zm00001d050411_P001	Maize	cytosol	90.0	90.76
EES15047	Sorghum	cytosol	90.0	90.76
EES13382	Sorghum	cytosol	90.0	90.76
KRG99078	Soybean	cytosol	90.0	90.0
PGSC0003DMT400080291	Potato	cytosol	90.0	90.0
PGSC0003DMT400003592	Potato	cytosol	90.0	90.0
EER98897	Sorghum	cytosol, mitochondrion	89.17	89.92
Zm00001d020450_P001	Maize	plastid	89.17	89.17
Solyc06g069860.2.1	Tomato	nucleus	89.17	89.17
Zm00001d032181_P001	Maize	mitochondrion	88.33	89.08
Zm00001d024571_P001	Maize	cytosol	88.33	89.08
AT1G69620.1	Thale cress	cytosol	88.33	89.08
AT1G26880.1	Thale cress	cytosol, mitochondrion, plastid	88.33	88.33
CDY65271	Canola	cytosol	85.83	85.83
CDY46432	Canola	cytosol	85.83	85.83
Bra016295.1-P	Field mustard	cytosol	85.83	85.83
CDY01759	Canola	cytosol, mitochondrion, plastid	85.0	85.0
AT3G28900.1	Thale cress	cytosol	85.0	85.0
CDX95913	Canola	cytosol, mitochondrion, plastid	85.0	85.0
Bra007871.1-P	Field mustard	cytosol, mitochondrion, plastid	84.17	84.17
CDY68374	Canola	cytosol, mitochondrion, plastid	84.17	84.17
CDY44081	Canola	cytosol, mitochondrion, plastid	84.17	84.17
Bra003991.1-P	Field mustard	cytosol, mitochondrion, plastid	84.17	84.17
Bra039041.1-P	Field mustard	cytosol, mitochondrion, plastid	84.17	84.17
CDY00108	Canola	extracellular	84.17	84.17
CDY20010	Canola	cytosol, mitochondrion, plastid	84.17	84.17
CDY04284	Canola	cytosol, mitochondrion, plastid	84.17	84.17
CDY07341	Canola	extracellular	84.17	84.17
Os09t0413500-01	Rice	plastid	42.5	82.26
Zm00001d049552_P007	Maize	cytosol	89.17	80.45
PGSC0003DMT400083150	Potato	cytosol	69.17	77.57
VIT_14s0108g00850.t01	Wine grape	cytosol	72.5	62.14
HORVU2Hr1G080340.2	Barley	mitochondrion	73.33	60.27
Zm00001d038662_P001	Maize	cytosol, mitochondrion	44.17	57.61
Bra004400.1-P	Field mustard	cytosol, mitochondrion, plastid	83.33	41.32
Zm00001d007386_P001	Maize	plastid	42.5	35.92

Protein Annotations

MapMan:17.1.2.1.34	Gene3D:3.40.1800.40	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G20070_001	EnsemblPlants:GSMUA_Achr3P20070_001
EnsemblPlants:GSMUA_Achr3T20070_001	InterPro:IPR038562	UniProt:M0SG73	PFAM:PF01199	PRINTS:PR01250	ScanProsite:PS01145
PANTHER:PTHR10759	PANTHER:PTHR10759:SF18	InterPro:Ribosomal_L34Ae	InterPro:Ribosomal_L34Ae_sf	InterPro:Ribosomal_L34e_CS	UniParc:UPI000295C438
SEG:seg	:	:	:	:	:

Description

60S ribosomal protein L34 [Source:GMGC_GENE;Acc:GSMUA_Achr3G20070_001]

Coordinates

chr3:+:21276811..21284898

Molecular Weight (calculated)

13753.9 Da

IEP (calculated)

12.124

GRAVY (calculated)

-0.882

Length

120 amino acids

Sequence
(BLAST)

001: MVQRLTYRKR HSYATKSNQT RVVKTPGGSL VYQYTNKRAS GPKCPVTGKR IQGIPHLRPT QYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKIQ KAKEKQASKS

Best Arabidopsis Sequence Match ( AT1G69620.1 )
(BLAST)

001: MVQRLVYRSR HSYATKSNQH RIVKTPGGKL TYQTTKKRAS GPKCPVTGKR IQGIPHLRPT EYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKLQ KAKEKVAPK

Arabidopsis Description

RPL34B60S ribosomal protein L34-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE65]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.