Factsheet for HORVU2Hr1G080340.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G323900.1	Wheat	unclear	65.75	80.67
TraesCS2B01G342800.1	Wheat	cytosol	65.75	80.67
TraesCS2A01G339200.1	Wheat	cytosol	65.75	80.67
HORVU7Hr1G071240.1	Barley	cytosol	63.01	77.31
GSMUA_Achr6P14630_001	Banana	plasma membrane	61.64	75.0
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	60.27	73.33
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	60.27	73.33
GSMUA_Achr3P20070_001	Banana	cytosol, mitochondrion	60.27	73.33
GSMUA_Achr8P17000_001	Banana	cytosol	59.59	72.5
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	59.59	72.5
KRH01164	Soybean	cytosol	58.9	71.67
GSMUA_Achr7P18110_001	Banana	cytosol	58.9	71.67
KRH40107	Soybean	endoplasmic reticulum	58.9	71.67
KRH45923	Soybean	cytosol	58.9	71.67
KRH70721	Soybean	cytosol	58.9	71.67
KRH74856	Soybean	cytosol	58.9	71.67
KRG99078	Soybean	cytosol	58.22	70.83
VIT_01s0026g02410.t01	Wine grape	cytosol	58.22	70.83
AT1G69620.1	Thale cress	cytosol	57.53	70.59
AT1G26880.1	Thale cress	cytosol, mitochondrion, plastid	57.53	70.0
Solyc05g007560.2.1	Tomato	nucleus	57.53	70.0
Solyc02g087930.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	56.85	69.17
PGSC0003DMT400080291	Potato	cytosol	56.85	69.17
PGSC0003DMT400003592	Potato	cytosol	56.85	69.17
GSMUA_Achr11P...	Banana	cytosol	56.16	68.33
Solyc06g069860.2.1	Tomato	nucleus	56.16	68.33
Bra016295.1-P	Field mustard	cytosol	56.16	68.33
CDY46432	Canola	cytosol	56.16	68.33
CDY65271	Canola	cytosol	56.16	68.33
CDX95913	Canola	cytosol, mitochondrion, plastid	55.48	67.5
CDY01759	Canola	cytosol, mitochondrion, plastid	55.48	67.5
CDY00108	Canola	extracellular	54.79	66.67
Bra039041.1-P	Field mustard	cytosol, mitochondrion, plastid	54.79	66.67
CDY04284	Canola	cytosol, mitochondrion, plastid	54.79	66.67
Bra007871.1-P	Field mustard	cytosol, mitochondrion, plastid	54.79	66.67
CDY07341	Canola	extracellular	54.79	66.67
CDY20010	Canola	cytosol, mitochondrion, plastid	54.79	66.67
CDY44081	Canola	cytosol, mitochondrion, plastid	54.79	66.67
CDY68374	Canola	cytosol, mitochondrion, plastid	54.79	66.67
Bra003991.1-P	Field mustard	cytosol, mitochondrion, plastid	54.79	66.67
AT3G28900.1	Thale cress	cytosol	54.11	65.83
PGSC0003DMT400083150	Potato	cytosol	41.78	57.01
VIT_14s0108g00850.t01	Wine grape	cytosol	44.52	46.43
Bra004400.1-P	Field mustard	cytosol, mitochondrion, plastid	54.79	33.06

Protein Annotations

MapMan:17.1.2.1.34	Gene3D:3.40.1800.40	UniProt:A0A287ILH7	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU2Hr1G080340
EnsemblPlants:HORVU2Hr1G080340.2	InterPro:IPR038562	PFAM:PF01199	PRINTS:PR01250	PANTHER:PTHR10759	PANTHER:PTHR10759:SF18
InterPro:Ribosomal_L34Ae	InterPro:Ribosomal_L34Ae_sf	UniParc:UPI000B474962	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:582332728..582334148

Molecular Weight (calculated)

16221.0 Da

IEP (calculated)

11.529

GRAVY (calculated)

-0.620

Length

146 amino acids

Sequence
(BLAST)

001: TPPSLTRPGL SKPQVRSAFS TGSFCQIPGL RFESLGCPCA QLAGNDAYRV IGAGGRLVYQ YTKKRASGPK CPVTGKKIQG IPHLRPTEYK RSRLSRNRRT
101: VNRPYGGVLS GQAVRERIIR AFLVEEQKIV KKVLKIQKTK EKQPSK

Best Arabidopsis Sequence Match ( AT1G26880.1 )
(BLAST)

001: MVQRLVYRSR HSYATKSNQH RIVKTPGGKL VYQTTKKRAS GPKCPVTGKR IQGIPHLRPS EYKRSRLSRN RRTVNRAYGG VLSGSAVRER IIRAFLVEEQ
101: KIVKKVLKLQ KAKEKVAPKA

Arabidopsis Description

RPL34A60S ribosomal protein L34-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42351]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.