Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 5
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G27100.1 | KXG22802 | AT1G09700.1 | 23141542 |
| AT2G27100.1 | OQU82704 | AT1G09700.1 | 23141542 |
| AT2G27100.1 | EES05486 | AT4G21670.1 | 23141542 |
| AT2G27100.1 | KXG26770 | AT4G21670.1 | 23141542 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G119000.1 | Wheat | nucleus | 38.3 | 62.2 |
| HORVU6Hr1G021620.2 | Barley | nucleus | 39.41 | 59.81 |
| VIT_00s0220g00050.t01 | Wine grape | cytosol | 3.33 | 55.1 |
| Os02t0149600-01 | Rice | nucleus | 42.98 | 52.4 |
| EER90312 | Sorghum | nucleus | 43.1 | 49.09 |
| TraesCS6B01G147000.1 | Wheat | nucleus | 43.35 | 47.06 |
| TraesCS6D01G108900.1 | Wheat | nucleus | 43.47 | 46.82 |
| VIT_13s0047g00310.t01 | Wine grape | nucleus | 33.62 | 46.59 |
| VIT_06s0009g01570.t01 | Wine grape | nucleus | 38.79 | 42.86 |
| KRH56284 | Soybean | endoplasmic reticulum | 37.68 | 42.86 |
| EES15338 | Sorghum | nucleus | 33.87 | 42.83 |
| AT2G27100.1 | Thale cress | nucleus | 37.81 | 42.64 |
| Bra034322.1-P | Field mustard | nucleus | 36.33 | 42.63 |
| KRH62750 | Soybean | nucleus | 37.32 | 42.62 |
| CDX77068 | Canola | nucleus | 35.71 | 42.03 |
| KRH44717 | Soybean | nucleus | 36.95 | 41.84 |
| CDY04478 | Canola | nucleus | 36.45 | 41.69 |
| Bra012034.1-P | Field mustard | nucleus | 36.33 | 41.55 |
| CDX71472 | Canola | nucleus | 35.71 | 41.25 |
| Solyc01g009090.2.1 | Tomato | nucleus | 36.95 | 40.11 |
| GSMUA_Achr5P22680_001 | Banana | extracellular | 7.39 | 31.09 |
Protein Annotations
| EnsemblPlants:KXG29470 | EnsemblPlantsGene:SORBI_3004G040800 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:Arsenite-R_2 |
| InterPro:DUF3546 | InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR13165 | PANTHER:PTHR13165:SF2 | PFAM:PF04959 |
| PFAM:PF12066 | ProteinID:KXG29470 | ProteinID:KXG29470.1 | ScanProsite:PS00028 | SEG:seg | UniParc:UPI0007F2E3E4 |
| UniProt:A0A194YNP9 | MapMan:15.5.15 | MapMan:16.10.2.1.3 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:3357487..3363170
Molecular Weight (calculated)
89860.2 Da
IEP (calculated)
10.390
GRAVY (calculated)
-0.787
Length
812 amino acids
Sequence
(BLAST)
(BLAST)
001: MEHALCSPAA APGASLTTAA PPKDLALLPP PPPPPLGSLR PQRLEGFVAR PAERTRRTRV GSPGAGGDRG HQRRSMPPLH LPHPPPLGSS RPELDDVVRL
101: QRDRDRDRDA PRRGNARRSG SSSGAGGDRR QRRSTTRRSL SPPLPVPPPP PPLLGSTRPE LAALVRREND HDAPRRGSAR RSGSPGAVAD RRPRRSTTRR
201: SPSPLLPLPP PPTPPLGSSS RPEVAAVVRV DSDHDARRGG SRKRGNGSPR KGAEGGRRRE RGSPPPRSPS PAPRKRSRRG SPRNECGRNE GRGNHACSRF
301: CSPDRPYSGY GAATIGQDTT GRLGLMTYKQ FIQVLEDDVS PAQAGCRYQE YRTEYISTQK RAYFDLNKNE DWLKDMYHPT KLLSVIRRRN DFCKTVARNL
401: ILDLRNGTLD LGPGVTAHAA IKSGKGNDGR SQDNADYGEK KRKHGRGPQK EIEPLSAAPK AHPISSQHRR IHTDIHRTLA LVKKLDSEKG IMENILLTGD
501: HGKSNVDKSC GRSKTPVAII RGFNTVKGLE GVELLDTLLT YLWRVHGVDY YGMSEMKHAK GFRHVRAENK SDSMAEYISA ADWEKKLDSF WEERLMNGED
601: PLVVLTAMDK IEAALVEVLE RYVRKMRDEN CIWKYFCGAK GCEKLFHAPE YVHKHLNLKH PDLVSTLASR VENDIYFQNY MNDPDAPGGK PFMQQTVPDR
701: MRQRLDEQMF DASGVWGSHA PLLPMCAHSL VLIPVPGAGP YGPFVPAPPE IAMQMIQKGL AGPDSAQNRK PSVLGPMLPM YPSFPLGSGI YRSYEDLDAP
801: MEEVSPLDFR SL
101: QRDRDRDRDA PRRGNARRSG SSSGAGGDRR QRRSTTRRSL SPPLPVPPPP PPLLGSTRPE LAALVRREND HDAPRRGSAR RSGSPGAVAD RRPRRSTTRR
201: SPSPLLPLPP PPTPPLGSSS RPEVAAVVRV DSDHDARRGG SRKRGNGSPR KGAEGGRRRE RGSPPPRSPS PAPRKRSRRG SPRNECGRNE GRGNHACSRF
301: CSPDRPYSGY GAATIGQDTT GRLGLMTYKQ FIQVLEDDVS PAQAGCRYQE YRTEYISTQK RAYFDLNKNE DWLKDMYHPT KLLSVIRRRN DFCKTVARNL
401: ILDLRNGTLD LGPGVTAHAA IKSGKGNDGR SQDNADYGEK KRKHGRGPQK EIEPLSAAPK AHPISSQHRR IHTDIHRTLA LVKKLDSEKG IMENILLTGD
501: HGKSNVDKSC GRSKTPVAII RGFNTVKGLE GVELLDTLLT YLWRVHGVDY YGMSEMKHAK GFRHVRAENK SDSMAEYISA ADWEKKLDSF WEERLMNGED
601: PLVVLTAMDK IEAALVEVLE RYVRKMRDEN CIWKYFCGAK GCEKLFHAPE YVHKHLNLKH PDLVSTLASR VENDIYFQNY MNDPDAPGGK PFMQQTVPDR
701: MRQRLDEQMF DASGVWGSHA PLLPMCAHSL VLIPVPGAGP YGPFVPAPPE IAMQMIQKGL AGPDSAQNRK PSVLGPMLPM YPSFPLGSGI YRSYEDLDAP
801: MEEVSPLDFR SL
001: MADVNLPPSD SVDNRLPEKS TSSSPPPPPP SSSLPQQEQE QDQQQLPLRR ERDSRERRDE RDIERPPPNR RERDRSPLPP PRRDYKRRPS LSPPPPYRDR
101: RHSPPQRRSP PQKRYRRDDN GYDGRRGSPR GGYGPPDRRF GYDHGGGYDR EMGGRPGYGD ERPHGRFMGR YQDWEGGRGG YGDASNSGNP QRDGLMSYKQ
201: FIQELEDDIL PSEAERRYQE YKSEYITTQK RAFFNTHKEE DWLKNKYHPT NLLSVIERRN DLAQKVAKDF LLDLQSGTLD LGPAVTALNK SGRTSEPNSE
301: DEAAGVGKRK RHGMGGAKEN ELLSAAPKAP SFTSDPKRIL TDVEQTQALV RKLDSEKKIE ENVLQGSETE KSGREKLHSG STGPVVIIRG LTSVKGLEGV
401: ELLDTLVTYL WRVHGLDYYG KVETNEAKGL RHVRAEGKVS DAKGDENESK FDSHWQERLK GQDPLEVMAA KEKIDAAATE ALDPHVRKIR DEKYGWKYGC
501: GAKGCTKLFH AAEFVYKHLK LKHTELVTEL TTKVREELYF QNYMNDPNAP GGQPATQQSG PRDRPIRRKP SMENRLRDDR GGRRERDGRA NGNDRNDRSE
601: DQQRGDNDGG NPGEVGYDAF GGQGGVHVPP FLSDINPPPM LMPVPGAGPL GPFVPAPPEV AMQMFRDPSG PNPPFEGSGR GGPAPFLLSP AFRQDPRRLR
701: SYQDLDAPEE EVTVIDYRSL
101: RHSPPQRRSP PQKRYRRDDN GYDGRRGSPR GGYGPPDRRF GYDHGGGYDR EMGGRPGYGD ERPHGRFMGR YQDWEGGRGG YGDASNSGNP QRDGLMSYKQ
201: FIQELEDDIL PSEAERRYQE YKSEYITTQK RAFFNTHKEE DWLKNKYHPT NLLSVIERRN DLAQKVAKDF LLDLQSGTLD LGPAVTALNK SGRTSEPNSE
301: DEAAGVGKRK RHGMGGAKEN ELLSAAPKAP SFTSDPKRIL TDVEQTQALV RKLDSEKKIE ENVLQGSETE KSGREKLHSG STGPVVIIRG LTSVKGLEGV
401: ELLDTLVTYL WRVHGLDYYG KVETNEAKGL RHVRAEGKVS DAKGDENESK FDSHWQERLK GQDPLEVMAA KEKIDAAATE ALDPHVRKIR DEKYGWKYGC
501: GAKGCTKLFH AAEFVYKHLK LKHTELVTEL TTKVREELYF QNYMNDPNAP GGQPATQQSG PRDRPIRRKP SMENRLRDDR GGRRERDGRA NGNDRNDRSE
601: DQQRGDNDGG NPGEVGYDAF GGQGGVHVPP FLSDINPPPM LMPVPGAGPL GPFVPAPPEV AMQMFRDPSG PNPPFEGSGR GGPAPFLLSP AFRQDPRRLR
701: SYQDLDAPEE EVTVIDYRSL
Arabidopsis Description
SESE [Source:UniProtKB/TrEMBL;Acc:A0A178VZD4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.