Factsheet for VIT_00s0220g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
nucleus 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P22680_001	Banana	extracellular	69.39	17.62
Zm00001d047626_P001	Maize	cytosol	36.73	16.51
Zm00001d006696_P001	Maize	nucleus	34.69	7.17
HORVU0Hr1G020790.1	Barley	nucleus	59.18	6.52
GSMUA_Achr7P19610_001	Banana	nucleus	71.43	6.46
VIT_13s0047g00310.t01	Wine grape	nucleus	75.51	6.31
VIT_06s0009g01570.t01	Wine grape	nucleus	87.76	5.85
Zm00001d046965_P001	Maize	nucleus	32.65	5.76
GSMUA_Achr6P01800_001	Banana	nucleus	63.27	5.73
HORVU7Hr1G052570.1	Barley	nucleus	59.18	5.5
Zm00001d049767_P001	Maize	extracellular, nucleus	63.27	4.94
EES15338	Sorghum	nucleus	63.27	4.83
Os02t0149600-01	Rice	nucleus	65.31	4.8
TraesCS6A01G119000.1	Wheat	nucleus	48.98	4.8
HORVU6Hr1G021620.2	Barley	nucleus	51.02	4.67
Zm00001d031542_P001	Maize	nucleus	63.27	4.64
Os08t0517300-01	Rice	plastid	61.22	4.64
TraesCS7A01G254300.1	Wheat	nucleus	59.18	4.51
TraesCS7B01G150500.1	Wheat	nucleus	59.18	4.51
TraesCS7D01G252800.1	Wheat	nucleus	59.18	4.51
GSMUA_Achr10P...	Banana	nucleus	67.35	4.5
HORVU7Hr1G097860.2	Barley	plastid	63.27	4.47
TraesCS7A01G423200.1	Wheat	nucleus	63.27	4.43
TraesCS7B01G323700.2	Wheat	nucleus	63.27	4.43
TraesCS7D01G416100.1	Wheat	nucleus	63.27	4.43
EER90312	Sorghum	nucleus	63.27	4.35
Zm00001d036495_P001	Maize	nucleus	63.27	4.29
Os06t0698859-01	Rice	nucleus	61.22	4.15
Zm00001d014655_P001	Maize	nucleus, plastid	61.22	4.04
KXG29470	Sorghum	nucleus, plastid	55.1	3.33
TraesCS6D01G108900.1	Wheat	nucleus	51.02	3.32
Zm00001d018785_P001	Maize	cytosol	18.37	3.27
TraesCS6B01G147000.1	Wheat	nucleus	48.98	3.21
Zm00001d046814_P001	Maize	cytosol	8.16	2.15
GSMUA_Achr5P22670_001	Banana	endoplasmic reticulum, golgi	10.2	1.1

Protein Annotations

ArrayExpress:VIT_00s0220g00050	EMBL:FN595254	EnsemblPlants:VIT_00s0220g00050.t01	EnsemblPlantsGene:VIT_00s0220g00050	PANTHER:PTHR13165	PANTHER:PTHR13165:SF2
ProteinID:CCB48297	ProteinID:CCB48297.1	SEG:seg	UniParc:UPI0002109833	UniProt:F6H7V5	MapMan:15.5.15
MapMan:16.10.2.1.3	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:14148238..14149451

Molecular Weight (calculated)

5059.3 Da

IEP (calculated)

3.260

GRAVY (calculated)

0.496

Length

49 amino acids

Sequence
(BLAST)

1: MFDTFGGQGM DVAPFPSDMP PPPVLIPVPG AGPLGPFVPA PPEVAMWIL

Best Arabidopsis Sequence Match ( AT2G27100.1 )
(BLAST)

001: MADVNLPPSD SVDNRLPEKS TSSSPPPPPP SSSLPQQEQE QDQQQLPLRR ERDSRERRDE RDIERPPPNR RERDRSPLPP PRRDYKRRPS LSPPPPYRDR
101: RHSPPQRRSP PQKRYRRDDN GYDGRRGSPR GGYGPPDRRF GYDHGGGYDR EMGGRPGYGD ERPHGRFMGR YQDWEGGRGG YGDASNSGNP QRDGLMSYKQ
201: FIQELEDDIL PSEAERRYQE YKSEYITTQK RAFFNTHKEE DWLKNKYHPT NLLSVIERRN DLAQKVAKDF LLDLQSGTLD LGPAVTALNK SGRTSEPNSE
301: DEAAGVGKRK RHGMGGAKEN ELLSAAPKAP SFTSDPKRIL TDVEQTQALV RKLDSEKKIE ENVLQGSETE KSGREKLHSG STGPVVIIRG LTSVKGLEGV
401: ELLDTLVTYL WRVHGLDYYG KVETNEAKGL RHVRAEGKVS DAKGDENESK FDSHWQERLK GQDPLEVMAA KEKIDAAATE ALDPHVRKIR DEKYGWKYGC
501: GAKGCTKLFH AAEFVYKHLK LKHTELVTEL TTKVREELYF QNYMNDPNAP GGQPATQQSG PRDRPIRRKP SMENRLRDDR GGRRERDGRA NGNDRNDRSE
601: DQQRGDNDGG NPGEVGYDAF GGQGGVHVPP FLSDINPPPM LMPVPGAGPL GPFVPAPPEV AMQMFRDPSG PNPPFEGSGR GGPAPFLLSP AFRQDPRRLR
701: SYQDLDAPEE EVTVIDYRSL

Arabidopsis Description

SESE [Source:UniProtKB/TrEMBL;Acc:A0A178VZD4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.