Factsheet for Os08t0517300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0639000-01
Os04t0529500-02
Os05t0307400-01
Os11t0109900-01
Os12t0109900-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G27100.1	Os05t0307400-01	AT1G09700.1	23141542
AT2G27100.1	Os11t0109900-01	AT1G09700.1	23141542
AT2G27100.1	Os12t0109900-02	AT1G09700.1	23141542
AT2G27100.1	Os02t0639000-01	AT4G21670.1	23141542
AT2G27100.1	Os04t0529500-02	AT4G21670.1	23141542

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G052570.1	Barley	nucleus	66.77	81.97
HORVU0Hr1G020790.1	Barley	nucleus	55.8	81.12
EES15338	Sorghum	nucleus	78.21	78.82
TraesCS7D01G252800.1	Wheat	nucleus	77.9	78.38
TraesCS7B01G150500.1	Wheat	nucleus	77.9	78.38
TraesCS7A01G254300.1	Wheat	nucleus	77.59	78.07
Zm00001d049767_P001	Maize	extracellular, nucleus	74.19	76.43
Zm00001d046965_P001	Maize	nucleus	31.84	74.1
Zm00001d031542_P001	Maize	nucleus	73.42	71.11
Zm00001d006696_P001	Maize	nucleus	24.27	66.24
VIT_00s0220g00050.t01	Wine grape	cytosol	4.64	61.22
VIT_13s0047g00310.t01	Wine grape	nucleus	47.76	52.73
Os06t0698859-01	Rice	nucleus	56.57	50.62
Bra034322.1-P	Field mustard	nucleus	52.24	48.84
KRH56284	Soybean	endoplasmic reticulum	53.79	48.74
AT2G27100.1	Thale cress	nucleus	53.94	48.47
CDX77068	Canola	nucleus	51.62	48.41
KRH44717	Soybean	nucleus	53.48	48.26
VIT_06s0009g01570.t01	Wine grape	nucleus	54.71	48.16
KRH62750	Soybean	nucleus	52.86	48.1
Solyc01g009090.2.1	Tomato	nucleus	55.49	47.99
CDX71472	Canola	nucleus	51.62	47.51
CDY04478	Canola	nucleus	51.31	46.76
Bra012034.1-P	Field mustard	nucleus	51.16	46.62
Os02t0149600-01	Rice	nucleus	45.13	43.84
Os06t0698900-01	Rice	nucleus	7.42	16.44

Protein Annotations

MapMan:15.5.15	MapMan:16.10.2.1.3	EntrezGene:4346039	EMBL:AK069175	InterPro:Arsenite-R_2	ProteinID:BAD09973.1
ProteinID:BAD09995.1	ProteinID:BAF24156.1	ProteinID:BAT06250.1	InterPro:DUF3546	ProteinID:EEE68996.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	EnsemblPlantsGene:Os08g0517300	EnsemblPlants:Os08t0517300-01	PFAM:PF04959
PFAM:PF12066	ScanProsite:PS00028	PANTHER:PTHR13165	PANTHER:PTHR13165:SF2	UniProt:Q7EZ93	UniParc:UPI000023AF9F
RefSeq:XP_015649800.1	InterPro:Znf_C2H2_type	SEG:seg	:	:	:

Description

ZOS8-11Zinc finger, C2H2-like domain containing protein. (Os08t0517300-01);Hypothetical conserved gene. (Os08t0517300-02)

Coordinates

chr8:-:25677128..25682344

Molecular Weight (calculated)

71413.5 Da

IEP (calculated)

7.366

GRAVY (calculated)

-0.986

Length

647 amino acids

Sequence
(BLAST)

001: MAEVARASAS PPPASASTGG DRKRGRSSPS LPPPPPGPPP QVPHGSKRHR RDEGGGGGFD RRRLGPGVGY DNPDDRRYGN DHGGAGGRGG YGDERGQGRN
101: FNRAPDWTDS GRGGWNDGPA NSRREGLMSY KQFMQELEDD VSPDEAQHRY EEYKSEYITT QKKAYFDLHK NDDWLKNKYH PTNLEIVMER RNELARTAAN
201: QFLQDLQNGS LDIGPGLTSS ATNKSGNSVD DTDANGKKGK LGKSQDDLYY AAPKAHPVSS EPRRIRIDVE LAQALICKLD SEKGIENNVL SGSDHDRAEK
301: DKSHGSMGPI VIIRGSSAVK GLEGAELLDT LVTYLWRIHG VDYYGMSETN EPKGLRHVKA DSRTFNGASS NAAEWEKKLD SFWQDRIQGQ DPMEILKAKD
401: KIDAAASEVL DPHVRKIRDE KYGWKYGCGA KGCTKLFHAP EFVQKHLKLK HADLVRELTS KVRENIYFDN YMSDPKAPGG MPIMQQPAPR EKVRQRPPIE
501: SRLRDERGNR RFDRNDSPTH DGSSDNPDDA YDSYGDPVMH GAFPPDIPAP PVLMPVPGAG PLGPFIPAPP EVAMRMMRDQ GGPPPFEPTG GPRPRRPGRG
601: GLPMGGPSPI LAAPLPPPHM HDPRKIRSYQ DLDAPEDEVT VMDYRSL

Best Arabidopsis Sequence Match ( AT2G27100.1 )
(BLAST)

001: MADVNLPPSD SVDNRLPEKS TSSSPPPPPP SSSLPQQEQE QDQQQLPLRR ERDSRERRDE RDIERPPPNR RERDRSPLPP PRRDYKRRPS LSPPPPYRDR
101: RHSPPQRRSP PQKRYRRDDN GYDGRRGSPR GGYGPPDRRF GYDHGGGYDR EMGGRPGYGD ERPHGRFMGR YQDWEGGRGG YGDASNSGNP QRDGLMSYKQ
201: FIQELEDDIL PSEAERRYQE YKSEYITTQK RAFFNTHKEE DWLKNKYHPT NLLSVIERRN DLAQKVAKDF LLDLQSGTLD LGPAVTALNK SGRTSEPNSE
301: DEAAGVGKRK RHGMGGAKEN ELLSAAPKAP SFTSDPKRIL TDVEQTQALV RKLDSEKKIE ENVLQGSETE KSGREKLHSG STGPVVIIRG LTSVKGLEGV
401: ELLDTLVTYL WRVHGLDYYG KVETNEAKGL RHVRAEGKVS DAKGDENESK FDSHWQERLK GQDPLEVMAA KEKIDAAATE ALDPHVRKIR DEKYGWKYGC
501: GAKGCTKLFH AAEFVYKHLK LKHTELVTEL TTKVREELYF QNYMNDPNAP GGQPATQQSG PRDRPIRRKP SMENRLRDDR GGRRERDGRA NGNDRNDRSE
601: DQQRGDNDGG NPGEVGYDAF GGQGGVHVPP FLSDINPPPM LMPVPGAGPL GPFVPAPPEV AMQMFRDPSG PNPPFEGSGR GGPAPFLLSP AFRQDPRRLR
701: SYQDLDAPEE EVTVIDYRSL

Arabidopsis Description

SESE [Source:UniProtKB/TrEMBL;Acc:A0A178VZD4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.