Factsheet for Os05t0307400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0149600-01
Os02t0639000-01
Os03t0583900-01
Os04t0529500-02
Os05t0307400-01
Os06t0698859-01
Os08t0517300-01
Os09t0315050-00
Os09t0508500-02
Os11t0109900-01
Os12t0109900-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G09700.1	Os05t0307400-01	AT1G09700.1	15821876
AT1G09700.1	Os11t0109900-01	AT1G09700.1	15821876
AT1G09700.1	Os12t0109900-02	AT1G09700.1	15821876
AT1G09700.1	Os02t0149600-01	AT2G27100.1	23141542
AT1G09700.1	Os06t0698859-01	AT2G27100.1	23141542
AT1G09700.1	Os08t0517300-01	AT2G27100.1	23141542
AT1G09700.1	Os03t0583900-01	AT3G03300.1	15821876
AT1G09700.1	Os09t0315050-00	AT3G03300.1	15821876
AT1G09700.1	Os02t0639000-01	AT4G21670.1	23141542
AT1G09700.1	Os04t0529500-02	AT4G21670.1	23141542
AT1G09700.1	Os09t0508500-02	AT5G41070.1	15821876
AT1G09700.1	Os09t0508500-02	AT5G41070.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0109900-01	Rice	cytosol	80.32	74.21
OQU82704	Sorghum	cytosol, nucleus	43.48	57.75
HORVU4Hr1G024480.3	Barley	cytosol, nucleus	49.43	52.94
TraesCS4D01G132400.1	Wheat	cytosol	48.51	51.96
TraesCS4A01G180400.1	Wheat	cytosol	48.28	51.84
KXG22802	Sorghum	mitochondrion	50.11	50.69
Zm00001d005065_P002	Maize	cytosol	49.66	50.0
TraesCS5B01G148100.2	Wheat	nucleus	58.12	47.92
TraesCS5D01G143500.2	Wheat	nucleus	57.89	47.92
CDX93488	Canola	plastid	29.29	46.55
Bra019999.1-P	Field mustard	plastid	29.06	46.35
CDY20678	Canola	cytosol	29.06	45.85
Bra030793.1-P	Field mustard	cytosol	29.06	45.68
TraesCS5A01G149400.2	Wheat	mitochondrion	57.44	45.14
GSMUA_Achr11P...	Banana	nucleus	38.44	44.92
HORVU5Hr1G047100.5	Barley	nucleus	56.98	43.46
CDX94957	Canola	cytosol, nucleus, plastid	27.92	43.11
KRH62246	Soybean	nucleus	32.95	40.11
CDY31070	Canola	endoplasmic reticulum, golgi	29.06	39.56
KRH52961	Soybean	nucleus	32.72	39.39
GSMUA_Achr8P16450_001	Banana	endoplasmic reticulum, golgi, vacuole	31.58	38.33
VIT_18s0001g07670.t01	Wine grape	nucleus	35.01	38.25
AT1G09700.1	Thale cress	plastid	31.12	32.46
PGSC0003DMT400024215	Potato	cytosol, nucleus, plastid	29.98	32.27
Solyc04g076420.2.1	Tomato	cytosol, nucleus, plastid	29.98	30.25
Os08t0384100-01	Rice	cytosol	18.08	25.32
Os12t0109900-02	Rice	cytosol	25.17	23.81
Os09t0508500-02	Rice	nucleus	14.42	15.59
Os10t0480500-01	Rice	cytosol, nucleus, plastid	17.39	14.79
Os01t0772000-01	Rice	mitochondrion, nucleus	14.42	14.29
Os05t0150400-01	Rice	cytosol, nucleus	16.93	12.27

Protein Annotations

MapMan:16.10.2.1.2	Gene3D:3.30.160.20	EntrezGene:4338371	EMBL:AK072444	ProteinID:BAF17070.1	ProteinID:BAS93274.1
InterPro:DRB	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003725	GO:GO:0003824
GO:GO:0004518	GO:GO:0004525	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006412	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0030422
GO:GO:0031053	GO:GO:0031054	GO:GO:0031929	GO:GO:0031931	GO:GO:0040029	GO:GO:0090502
InterPro:IPR014720	EnsemblPlantsGene:Os05g0307400	EnsemblPlants:Os05t0307400-01	PFAM:PF00035	PFAM:PF14538	PRINTS:PR01547
PFscan:PS50137	PANTHER:PTHR11207	PANTHER:PTHR11207:SF1	UniProt:Q0DJA3	InterPro:Raptor_N	SMART:SM00358
SMART:SM01302	SUPFAM:SSF54768	UniParc:UPI0000E1242F	RefSeq:XP_015640437.1	InterPro:dsRBD_dom	SEG:seg

Description

DRB3Similar to Regulatory associated protein of mTOR (Raptor) (P150 target of rapamycin (TOR)-scaffold protein). (Os05t0307400-01)

Coordinates

chr5:-:13939693..13946672

Molecular Weight (calculated)

47721.0 Da

IEP (calculated)

7.315

GRAVY (calculated)

-0.504

Length

437 amino acids

Sequence
(BLAST)

001: MKKKSAPTPL PPETANTSPA PIGATAGIRV ENCYVFKSRL QEYAQKAGLQ TPEYHTSKEG PSHEPVFKST VVINNTSYGS LPGFSNRKAA EQSAAEVALM
101: EIVKSIPANA NIPAVQETGL CKNLLQEYAQ KMNYAIPSYI CTKPASGLAP FLCTVEIGGI QYIGAAARTK KDAEIKAART ALLAIQGQSE GSANGATKYI
201: VVPGKRVGKE VEKRPIETPK PLKAKKGGFK KKWNKRKFMK KDGQAVDVEK DEARVAGDAH DSDVLMQPTV ITQEASCGTL FLQPCEEAKR VEDEPPRDIE
301: MVQPDKENQH SDAALVQPDD EARVEQEPSR DISVVQPNEE AISAKQEPSI DAATLQPKEE AMKTGCVALV LCLNISVDPP DVIKISPCVR KECWIDPFSM
401: AAPKALETIG KTLHSQYERW QPKARYKLQL DPTLEEV

Best Arabidopsis Sequence Match ( AT1G09700.2 )
(BLAST)

001: MTSTDVSSGV SNCYVFKSRL QEYAQKYKLP TPVYEIVKEG PSHKSLFQST VILDGVRYNS LPGFFNRKAA EQSAAEVALR ELAKSSELSQ CVSQPVHETG
101: LCKNLLQEYA QKMNYAIPLY QCQKVETLGR VTQFTCTVEI GGIKYTGAAT RTKKDAEISA GRTALLAIQS DTKNNLANYN TQLTVLPCEK KTIQAAIPLK
201: ETVKTLKARK AQFKKKAQKG KRTVAKNPED IIIPPQPTDH CQNDQSEKIE TTPNLEPSSC MNGLKEAAFG SVETEASHA

Arabidopsis Description

DRB1Double-stranded RNA-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04492]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.