Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0220g00050.t01 | Wine grape | cytosol | 17.62 | 69.39 |
| Zm00001d047626_P001 | Maize | cytosol | 26.94 | 47.71 |
| GSMUA_Achr6P01800_001 | Banana | nucleus | 61.66 | 22.0 |
| GSMUA_Achr7P19610_001 | Banana | nucleus | 61.14 | 21.77 |
| GSMUA_Achr10P... | Banana | nucleus | 59.59 | 15.67 |
| TraesCS6A01G119000.1 | Wheat | nucleus | 37.31 | 14.4 |
| VIT_13s0047g00310.t01 | Wine grape | nucleus | 43.52 | 14.33 |
| VIT_06s0009g01570.t01 | Wine grape | nucleus | 52.33 | 13.74 |
| HORVU6Hr1G021620.2 | Barley | nucleus | 37.31 | 13.46 |
| KRH56284 | Soybean | endoplasmic reticulum | 49.22 | 13.31 |
| KRH62750 | Soybean | nucleus | 48.7 | 13.22 |
| Bra034322.1-P | Field mustard | nucleus | 46.11 | 12.86 |
| CDX71472 | Canola | nucleus | 46.63 | 12.8 |
| CDX77068 | Canola | nucleus | 45.6 | 12.75 |
| Solyc01g009090.2.1 | Tomato | nucleus | 48.7 | 12.57 |
| EER90312 | Sorghum | nucleus | 46.11 | 12.48 |
| TraesCS7D01G416100.1 | Wheat | nucleus | 44.56 | 12.29 |
| TraesCS7B01G323700.2 | Wheat | nucleus | 44.56 | 12.29 |
| TraesCS7A01G423200.1 | Wheat | nucleus | 44.56 | 12.29 |
| KRH44717 | Soybean | nucleus | 45.08 | 12.13 |
| HORVU7Hr1G097860.2 | Barley | plastid | 43.52 | 12.12 |
| Bra012034.1-P | Field mustard | nucleus | 44.56 | 12.11 |
| CDY04478 | Canola | nucleus | 44.56 | 12.11 |
| AT2G27100.1 | Thale cress | nucleus | 45.08 | 12.08 |
| Os06t0698859-01 | Rice | nucleus | 44.04 | 11.76 |
| Os02t0149600-01 | Rice | nucleus | 34.72 | 10.06 |
| TraesCS6D01G108900.1 | Wheat | nucleus | 37.31 | 9.55 |
| TraesCS6B01G147000.1 | Wheat | nucleus | 36.79 | 9.49 |
| KXG29470 | Sorghum | nucleus, plastid | 31.09 | 7.39 |
| GSMUA_Achr5P22670_001 | Banana | endoplasmic reticulum, golgi | 11.92 | 5.04 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P22680_001 | EnsemblPlants:GSMUA_Achr5T22680_001 | EnsemblPlantsGene:GSMUA_Achr5G22680_001 | PANTHER:PTHR13165 | PANTHER:PTHR13165:SF2 | SEG:seg |
| SignalP:SignalP-noTM | UniParc:UPI0002951C85 | UniProt:M0T0U3 | MapMan:15.5.15 | MapMan:16.10.2.1.3 | : |
Description
Putative ZOS6-09 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G22680_001]
Coordinates
chr5:+:24641633..24642727
Molecular Weight (calculated)
21219.1 Da
IEP (calculated)
7.274
GRAVY (calculated)
-0.710
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MCHNHLHLDF KIVLSCFATL LQKVKIQRRK ALLGDRLRDE HGNRRDLDRN HRDGDRDDMT GNSPRDANGA MEGENHEKSP YDTYGGQGLH GSFPSDVPPP
101: PLLVPVPGAG PLGPFVPAPP EVAIRMLRET GGPSSFESNG GPRGIKGRLG PQVSVPAPIL PSPAFRHDPR RIRSYQDLDA PEDDVTVIDY RSL
101: PLLVPVPGAG PLGPFVPAPP EVAIRMLRET GGPSSFESNG GPRGIKGRLG PQVSVPAPIL PSPAFRHDPR RIRSYQDLDA PEDDVTVIDY RSL
001: MADVNLPPSD SVDNRLPEKS TSSSPPPPPP SSSLPQQEQE QDQQQLPLRR ERDSRERRDE RDIERPPPNR RERDRSPLPP PRRDYKRRPS LSPPPPYRDR
101: RHSPPQRRSP PQKRYRRDDN GYDGRRGSPR GGYGPPDRRF GYDHGGGYDR EMGGRPGYGD ERPHGRFMGR YQDWEGGRGG YGDASNSGNP QRDGLMSYKQ
201: FIQELEDDIL PSEAERRYQE YKSEYITTQK RAFFNTHKEE DWLKNKYHPT NLLSVIERRN DLAQKVAKDF LLDLQSGTLD LGPAVTALNK SGRTSEPNSE
301: DEAAGVGKRK RHGMGGAKEN ELLSAAPKAP SFTSDPKRIL TDVEQTQALV RKLDSEKKIE ENVLQGSETE KSGREKLHSG STGPVVIIRG LTSVKGLEGV
401: ELLDTLVTYL WRVHGLDYYG KVETNEAKGL RHVRAEGKVS DAKGDENESK FDSHWQERLK GQDPLEVMAA KEKIDAAATE ALDPHVRKIR DEKYGWKYGC
501: GAKGCTKLFH AAEFVYKHLK LKHTELVTEL TTKVREELYF QNYMNDPNAP GGQPATQQSG PRDRPIRRKP SMENRLRDDR GGRRERDGRA NGNDRNDRSE
601: DQQRGDNDGG NPGEVGYDAF GGQGGVHVPP FLSDINPPPM LMPVPGAGPL GPFVPAPPEV AMQMFRDPSG PNPPFEGSGR GGPAPFLLSP AFRQDPRRLR
701: SYQDLDAPEE EVTVIDYRSL
101: RHSPPQRRSP PQKRYRRDDN GYDGRRGSPR GGYGPPDRRF GYDHGGGYDR EMGGRPGYGD ERPHGRFMGR YQDWEGGRGG YGDASNSGNP QRDGLMSYKQ
201: FIQELEDDIL PSEAERRYQE YKSEYITTQK RAFFNTHKEE DWLKNKYHPT NLLSVIERRN DLAQKVAKDF LLDLQSGTLD LGPAVTALNK SGRTSEPNSE
301: DEAAGVGKRK RHGMGGAKEN ELLSAAPKAP SFTSDPKRIL TDVEQTQALV RKLDSEKKIE ENVLQGSETE KSGREKLHSG STGPVVIIRG LTSVKGLEGV
401: ELLDTLVTYL WRVHGLDYYG KVETNEAKGL RHVRAEGKVS DAKGDENESK FDSHWQERLK GQDPLEVMAA KEKIDAAATE ALDPHVRKIR DEKYGWKYGC
501: GAKGCTKLFH AAEFVYKHLK LKHTELVTEL TTKVREELYF QNYMNDPNAP GGQPATQQSG PRDRPIRRKP SMENRLRDDR GGRRERDGRA NGNDRNDRSE
601: DQQRGDNDGG NPGEVGYDAF GGQGGVHVPP FLSDINPPPM LMPVPGAGPL GPFVPAPPEV AMQMFRDPSG PNPPFEGSGR GGPAPFLLSP AFRQDPRRLR
701: SYQDLDAPEE EVTVIDYRSL
Arabidopsis Description
SESE [Source:UniProtKB/TrEMBL;Acc:A0A178VZD4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.