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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, cytosol

Predictor Summary:
  • nucleus 2
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG30444 Sorghum cytosol 76.04 61.97
GSMUA_Achr6P12560_001 Banana cytosol 60.21 53.42
GSMUA_Achr10P... Banana extracellular, plasma membrane 62.08 52.74
CDY23417 Canola cytosol 56.67 50.84
GSMUA_Achr3P02760_001 Banana cytosol 63.75 49.12
AT2G44090.1 Thale cress cytosol 58.96 48.63
Os11t0246900-01 Rice mitochondrion 57.29 47.74
GSMUA_Achr6P18250_001 Banana cytosol 61.25 47.42
GSMUA_AchrUn_... Banana cytosol 59.17 46.94
CDY17887 Canola cytosol 58.33 46.74
CDX71861 Canola cytosol 58.33 46.36
CDY05963 Canola cytosol 58.33 46.36
Bra004804.1-P Field mustard cytosol 58.33 46.13
KRH01853 Soybean cytosol 58.12 46.12
Bra007492.1-P Field mustard cytosol 57.92 46.03
AT3G59910.2 Thale cress cytosol 58.54 45.99
CDX79783 Canola cytosol 58.12 45.96
KRH51312 Soybean cytosol 57.5 45.62
PGSC0003DMT400016554 Potato cytosol 58.75 44.83
PGSC0003DMT400035669 Potato cytosol 59.17 44.72
Solyc08g015780.2.1 Tomato cytosol 58.96 44.57
Solyc12g017540.1.1 Tomato cytosol 57.92 44.06
Zm00001d016858_P001 Maize cytosol 76.88 43.77
VIT_05s0094g01540.t01 Wine grape endoplasmic reticulum, golgi, vacuole 60.0 29.42
Protein Annotations
EnsemblPlants:Os02t0562400-01EnsemblPlantsGene:Os02g0562400Gene3D:1.25.40.20InterPro:Ankyrin_rpt-contain_domInterPro:Ankyrin_rpt-contain_sfInterPro:IPR020683
InterPro:IPR036770PANTHER:PTHR36024ProteinID:BAF09066.1ProteinID:BAS79278.1SUPFAM:SSF48403UniParc:UPI0000DF0756
UniProt:Q0E0C2MapMan:35.1::::
Description
Ankyrin repeat containing protein. (Os02t0562400-01)
Coordinates
chr2:-:21325447..21328424
Molecular Weight (calculated)
52437.9 Da
IEP (calculated)
5.825
GRAVY (calculated)
0.173
Length
480 amino acids
Sequence
(BLAST)
001: DYGLSVALDA IWFLRTEQDL QGLNHLIGKI VESGAKDFAR AILRTSLLAS CVVACQSKAL TLGDSKEIIA QRLHDRLQDC PGGERLQIEA GAKVQKFIEW
101: ALQCIHLHRC SEDTECYKAN CSTHQEVQFH LSAFKAFLDI AGDNLSGKIF TEAFDAACFP LTLFSTLFEP GWSSGSSAVA IQGLLSLLVE GGAENVNQCF
201: LEASRFGSTE LVRILLKIAH QNSLAVDVDL ALVYASHYCK FETMACLVDE GHATSFLCPL VKASERGCLQ VVQWFVNRHV SDIEMCLAVT TAASCGHFAV
301: ATYLLAHIPR HVLEALSPQI LKAARGQGSG SFEGVSFLLR SNFLNDAAAT YAVADSIATT STMDIPQDLV DFLKEQWSQA AFAEGVEAGE DHFVNITRVL
401: RRGASPIRLH DLPEPMALAI AYLPLYRACA SARGQLLPQR LRGELVEAVG RLGVPVNMEN NRRDFLAVLE HYFPSFITGA
Best Arabidopsis Sequence Match ( AT2G44090.5 )
(BLAST)
001: MENDDMYPDE PVGSDLEPQE SDVVFARESP LVGIITQPTK CSGSTAKILK CRGLEQQKKL NRQDRIELGR LFQGAVSSQD WQLSERFIQL ADPQTLNDLL
101: CISLDSIWFL STEHELRGIT ELIAKIICHG AQDYTRATLR TSFLASCVSS CHSRTVSLAD TVTVMAQRLH ERLQECNGDE VLKAEAGAKV QKFTEWALKC
201: IGFHSRCQGP RDKANQDSAA EIQLQLSAFK MFLDLAGNHL SGKDFTEAFD AACFPLTLFS TSFNPGWASG ISATVIHGLL GMLVEGGADN VNQCFLEASR
301: FGSTELVRIL LQIAQRNSLD VDVDLALGFA SHYSKIETMD CLVEEGHAIA FLGPLMRAAE RGCMQVVQWF VKRGCREMEL CLALTAATSS SQVEVAAYLL
401: PHVPRPVLTA LSIEILKAAG ERSGGSLHGV EFLLKSDFLG DPAATYSVAD TIAKSEDESV PSDLKSFLQE QWSEAAFNQG LKESRENYMN FMRVLKLGES
501: AISLKDLPAP LRVAIAYMPL YRECVDAGGR LLSQKLRGQL VEAATQLEGF DVDTEEVKKG HHQLMTILEH HLPLFLVKAS LH
Arabidopsis Description
AT2G44090 protein [Source:UniProtKB/TrEMBL;Acc:O80579]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.