Factsheet for AT3G59910.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05963	Canola	cytosol	88.05	89.07
Bra007492.1-P	Field mustard	cytosol	87.72	88.74
CDX71861	Canola	cytosol	87.56	88.58
AT2G44090.1	Thale cress	cytosol	74.14	77.84
GSMUA_Achr6P12560_001	Banana	cytosol	63.5	71.72
KRH51312	Soybean	cytosol	70.21	70.91
KRH01853	Soybean	cytosol	69.89	70.58
Solyc08g015780.2.1	Tomato	cytosol	72.83	70.08
PGSC0003DMT400035669	Potato	cytosol	72.83	70.08
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	63.67	68.85
PGSC0003DMT400016554	Potato	cytosol	70.7	68.68
Solyc12g017540.1.1	Tomato	cytosol	70.38	68.15
GSMUA_Achr3P02760_001	Banana	cytosol	68.74	67.42
HORVU5Hr1G007560.1	Barley	cytosol	23.57	62.34
GSMUA_Achr6P18250_001	Banana	cytosol	63.01	62.1
Os11t0246900-01	Rice	mitochondrion	58.43	61.98
GSMUA_AchrUn_...	Banana	cytosol	60.72	61.32
Os02t0562400-01	Rice	cytosol, extracellular	45.99	58.54
TraesCS4B01G087400.1	Wheat	cytosol	58.76	57.81
TraesCS4D01G084700.1	Wheat	cytosol	58.43	57.49
Zm00001d049019_P003	Maize	cytosol	58.43	57.4
EES09541	Sorghum	nucleus	58.43	57.21
TraesCS4A01G229000.1	Wheat	cytosol, extracellular, plasma membrane	58.43	55.09
HORVU4Hr1G014910.1	Barley	mitochondrion	59.57	52.37
KXG30444	Sorghum	cytosol	48.77	50.59
HORVU3Hr1G051770.2	Barley	cytosol, mitochondrion	25.53	46.71
VIT_05s0094g01540.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	73.49	45.86
Zm00001d016858_P001	Maize	cytosol	48.45	35.11

Protein Annotations

Gene3D:1.25.40.20	MapMan:35.1	EntrezGene:825161	ProteinID:AEE79984.1	ProteinID:ANM65034.1	ArrayExpress:AT3G59910
EnsemblPlantsGene:AT3G59910	RefSeq:AT3G59910	TAIR:AT3G59910	RefSeq:AT3G59910-TAIR-G	EnsemblPlants:AT3G59910.2	EMBL:AY099865
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	Unigene:At.20090	EMBL:BT008381	ProteinID:CAB75810.1	GO:GO:0008150
InterPro:IPR020683	InterPro:IPR036770	RefSeq:NP_001327032.1	RefSeq:NP_191550.1	PANTHER:PTHR36024	UniProt:Q9M1Y3
SUPFAM:SSF48403	UniParc:UPI00000A130F	SEG:seg	:	:	:

Description

SKIP35Ankyrin repeat protein SKIP35 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1Y3]

Coordinates

chr3:-:22130483..22133519

Molecular Weight (calculated)

67062.5 Da

IEP (calculated)

4.970

GRAVY (calculated)

-0.075

Length

611 amino acids

Sequence
(BLAST)

001: MEKEGVCDTI NLSDQMYPDE PFCSEMKTET IASSQKFEGG EGSKVVFSRE APLIGKDSAG TNSGECCGCS AKKLNFKGDD DLVEKENIEQ QKKLNRQERI
101: ELGRLFQGAV TSLDWELAER LIQLADPQTL NDLLCVGLDS VWFLSTKPEF QGITGLIKKI ICHGAHDFTR ATLRTSFLAS CVSACQSRTM SLSDTVTVMA
201: QRLHERLQEC NGDEILKAEA GAKVQKFTEW ALKCIGFHSR CQGAKDRVSQ NSAAEIELQL SAFKMFLDLA GNHLSGRDFT EAFDAACFPL TLFSNSFDPG
301: WASGMSATVI QGLLGMLVEG GADNVNQCFL EASRFGSTEL VRVLLQIAQR NSLDVDVDLA LGFASHYCKI GTMKCLVEEG NAIAFLGPLM RAAERGCMQV
401: VQWFVKRGCR DMELCLALTA ATSSCQVEVA AYLLPRVPPP VLTALSIEIL KAAGERSGGS LQGVEFLLKS DFLGDSTATY SVADSIARSS EDESVPSDLK
501: SFLQEHWSES AFEKGMRESH DDFMNFMRVL KKGESAISLR DLPAPLRVAI AYMPLYRECM KADGRLLSQR LRGQLVEAVR QLQGCAVAVV EVSQTRNLMA
601: VLEHHLTAIF D

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.