Factsheet for HORVU4Hr1G014910.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G075650.1
HORVU7Hr1G038130.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44090.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT2G44090.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G084700.1	Wheat	cytosol	83.45	93.4
TraesCS4B01G087400.1	Wheat	cytosol	83.31	93.24
TraesCS4A01G229000.1	Wheat	cytosol, extracellular, plasma membrane	83.6	89.66
HORVU5Hr1G007560.1	Barley	cytosol	29.64	89.18
Os11t0246900-01	Rice	mitochondrion	69.21	83.51
EES09541	Sorghum	nucleus	69.93	77.88
Zm00001d049019_P003	Maize	cytosol	68.35	76.37
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	54.53	67.08
GSMUA_Achr6P12560_001	Banana	cytosol	51.65	66.36
CDY23417	Canola	cytosol	48.78	63.36
GSMUA_Achr3P02760_001	Banana	cytosol	56.55	63.08
KRH01853	Soybean	cytosol	54.53	62.64
HORVU3Hr1G051770.2	Barley	cytosol, mitochondrion	30.07	62.57
KRH51312	Soybean	cytosol	54.1	62.15
Solyc08g015780.2.1	Tomato	cytosol	56.69	62.05
PGSC0003DMT400035669	Potato	cytosol	56.4	61.73
AT2G44090.1	Thale cress	cytosol	51.51	61.51
PGSC0003DMT400016554	Potato	cytosol	55.25	61.05
GSMUA_Achr6P18250_001	Banana	cytosol	54.24	60.81
Solyc12g017540.1.1	Tomato	cytosol	54.82	60.38
GSMUA_AchrUn_...	Banana	cytosol	52.52	60.33
CDY05963	Canola	cytosol	51.94	59.77
CDX71861	Canola	cytosol	51.94	59.77
Bra007492.1-P	Field mustard	cytosol	51.8	59.6
AT3G59910.2	Thale cress	cytosol	52.37	59.57
CDY17887	Canola	cytosol	51.22	59.43
Bra004804.1-P	Field mustard	cytosol	51.37	58.81
CDX79783	Canola	cytosol	51.22	58.65
VIT_05s0094g01540.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	57.55	40.86

Protein Annotations

EnsemblPlants:HORVU4Hr1G014910.1	EnsemblPlantsGene:HORVU4Hr1G014910	Gene3D:1.25.40.20	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:IPR020683
InterPro:IPR036770	PANTHER:PTHR36024	SEG:seg	SUPFAM:SSF48403	UniParc:UPI000B465E6B	UniProt:A0A287NC20
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:55856067..55860555

Molecular Weight (calculated)

76321.3 Da

IEP (calculated)

5.224

GRAVY (calculated)

-0.098

Length

695 amino acids

Sequence
(BLAST)

001: RSPVFLPSGA LVRRRPSGIR CLLFCSRRFR FVFLQVVVGS AGARRWFVQS CCPRRALSSV PFPSGRIEGI RQGGMDVEGR MNLEIGSKDM EVETKNLKLE
101: DPLPSSEMDM DEPGVAESAD VDATNGSSKE CPLTPRDSMT SKVSVAKKPR SVSTDFGDEL DLELGSGERD PARQQDRKLS RQDRVELSRL FQRAVSSHDW
201: ESADGLLGRA DAQGLNDVLC VAVDAIWFLS DKEELYAIVS LIKRIVSAGA NDFTRAALRT SFLASCVSAC RGRTTSLSDA VSFMGQKLHE RLQESHGDEV
301: LKAEASAKVH KFTEWALKCI GLHSRVRESK GRGNHGTIIE VQLQLSAFKT FLDIADNDLT GKDFTEAFDA ACFPLTLFSS TFDQGWASGI SASAIQGLLE
401: LLVEGGADNV NQCFLEAARY GSTELVRILL QIAQRNSLDI DVDLALGFAA HYGKLETMGC LVEEGNTVAF LGPLMRAAER GCLQVVEWFV NRGCRDMELC
501: LALTAATSSS QVEVAAYLLP LVPQIVLAPL SIEIVKAAGE RSTGSLQGVD FLLRSDFLND PAATYAVADS IARCADEAVD AKLRSFMLEQ WSEEAFLEGF
601: ASSQEHFVNI TRIMQRGESP VALRELPLQL VIAMAYLPLY RECNESGGRL LPQRLRGQLV EAAGRLEGRQ LDRGTQQREL LAILEHHLPR FLVQT

Best Arabidopsis Sequence Match ( AT2G44090.5 )
(BLAST)

001: MENDDMYPDE PVGSDLEPQE SDVVFARESP LVGIITQPTK CSGSTAKILK CRGLEQQKKL NRQDRIELGR LFQGAVSSQD WQLSERFIQL ADPQTLNDLL
101: CISLDSIWFL STEHELRGIT ELIAKIICHG AQDYTRATLR TSFLASCVSS CHSRTVSLAD TVTVMAQRLH ERLQECNGDE VLKAEAGAKV QKFTEWALKC
201: IGFHSRCQGP RDKANQDSAA EIQLQLSAFK MFLDLAGNHL SGKDFTEAFD AACFPLTLFS TSFNPGWASG ISATVIHGLL GMLVEGGADN VNQCFLEASR
301: FGSTELVRIL LQIAQRNSLD VDVDLALGFA SHYSKIETMD CLVEEGHAIA FLGPLMRAAE RGCMQVVQWF VKRGCREMEL CLALTAATSS SQVEVAAYLL
401: PHVPRPVLTA LSIEILKAAG ERSGGSLHGV EFLLKSDFLG DPAATYSVAD TIAKSEDESV PSDLKSFLQE QWSEAAFNQG LKESRENYMN FMRVLKLGES
501: AISLKDLPAP LRVAIAYMPL YRECVDAGGR LLSQKLRGQL VEAATQLEGF DVDTEEVKKG HHQLMTILEH HLPLFLVKAS LH

Arabidopsis Description

AT2G44090 protein [Source:UniProtKB/TrEMBL;Acc:O80579]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.