CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88112
EES07255

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44090.1	EER88112	AT3G47620.1	21798944
AT2G44090.1	EES07255	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049019_P003	Maize	cytosol	92.95	93.25
Os11t0246900-01	Rice	mitochondrion	76.44	82.81
HORVU5Hr1G007560.1	Barley	cytosol	30.13	81.39
TraesCS4D01G084700.1	Wheat	cytosol	76.76	77.13
TraesCS4B01G087400.1	Wheat	cytosol	76.76	77.13
TraesCS4A01G229000.1	Wheat	cytosol, extracellular, plasma membrane	76.6	73.77
HORVU4Hr1G014910.1	Barley	mitochondrion	77.88	69.93
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	59.94	66.19
GSMUA_Achr6P12560_001	Banana	cytosol	57.05	65.8
CDY23417	Canola	cytosol	54.33	63.36
AT2G44090.1	Thale cress	cytosol	57.21	61.34
GSMUA_Achr3P02760_001	Banana	cytosol	61.06	61.16
PGSC0003DMT400016554	Potato	cytosol	61.54	61.05
Solyc08g015780.2.1	Tomato	cytosol	62.02	60.94
KRH51312	Soybean	cytosol	58.97	60.83
KRH01853	Soybean	cytosol	58.97	60.83
GSMUA_Achr6P18250_001	Banana	cytosol	60.26	60.65
CDY17887	Canola	cytosol	58.17	60.6
PGSC0003DMT400035669	Potato	cytosol	61.54	60.47
Solyc12g017540.1.1	Tomato	cytosol	61.06	60.38
GSMUA_AchrUn_...	Banana	cytosol	57.85	59.67
CDX79783	Canola	cytosol	58.01	59.64
Bra004804.1-P	Field mustard	cytosol	58.01	59.64
Bra007492.1-P	Field mustard	cytosol	56.89	58.77
CDY05963	Canola	cytosol	56.73	58.61
CDX71861	Canola	cytosol	56.73	58.61
AT3G59910.2	Thale cress	cytosol	57.21	58.43
HORVU3Hr1G051770.2	Barley	cytosol, mitochondrion	30.13	56.29
KXG30444	Sorghum	cytosol	45.67	48.39
VIT_05s0094g01540.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	61.7	39.33

Protein Annotations

EnsemblPlants:EES09541	EnsemblPlantsGene:SORBI_3005G084800	EntrezGene:8076908	Gene3D:1.25.40.20	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf
InterPro:IPR020683	InterPro:IPR036770	PANTHER:PTHR36024	ProteinID:EES09541	ProteinID:EES09541.1	RefSeq:XP_002450553.1
SEG:seg	SUPFAM:SSF48403	unigene:Sbi.17989	UniParc:UPI0001A868E7	UniProt:C5Y7R7	MapMan:35.1

Description

hypothetical protein

Coordinates

chr5:-:11558594..11563138

Molecular Weight (calculated)

68405.2 Da

IEP (calculated)

4.770

GRAVY (calculated)

-0.182

Length

624 amino acids

Sequence
(BLAST)

001: MEVDRRKNLQ IGSKGKEEVQ SKNQRREEPL ASSEVDMDEP EAAESGDMVV DGNNGSSKES PVPPMDSKNS KGCAAKKRRS VSADFGAELD LDLGNGEESG
101: AQQEERKLSR QDRVELCRSF QHAVSSHDWE SAEGLVGMAD AQGLNDVLCV AVDAIWFLSD KDELLAIVGL IRRIVSEGAK DFTRAALRTS FLASCVSACR
201: GRSTSLADAV SFMGQKLHER LQESQGDEVL KAEASAKVHR FTEWALKCIG LHSRVRENRG KGNHDTVIEV QLQLSAFKTF LDLADNELTG KDFTEAFDAA
301: CFPLTLFSTT FDQGWASGIS AAAVQGLLEL LVEGGADNVN QCFLEAARYG STELVRILLQ IAQRNSLDID VDLALGFAAH YGKIETMGCL VEEGNAVGFL
401: GPLMRAAERG CLQVVEWFVN HGCREMELCL ALTAATSSSQ IAVAAYLLPL VPQHVLAPLS IEIIKAAGER STGSLHGVDF LLRSDFLNDP AATYAVADSI
501: ARCTDEAVDA KLRSFMNEHW SEAAFSAGFE SAQQHFVNFM RIMERGESPI RLGDLPLELV IAMAYLPLYK ECMNSIGRLL PQRLRGQLVE AASRLEDRQV
601: ERDSQSRELL AILEHHIPRF MTQT

Best Arabidopsis Sequence Match ( AT2G44090.5 )
(BLAST)

001: MENDDMYPDE PVGSDLEPQE SDVVFARESP LVGIITQPTK CSGSTAKILK CRGLEQQKKL NRQDRIELGR LFQGAVSSQD WQLSERFIQL ADPQTLNDLL
101: CISLDSIWFL STEHELRGIT ELIAKIICHG AQDYTRATLR TSFLASCVSS CHSRTVSLAD TVTVMAQRLH ERLQECNGDE VLKAEAGAKV QKFTEWALKC
201: IGFHSRCQGP RDKANQDSAA EIQLQLSAFK MFLDLAGNHL SGKDFTEAFD AACFPLTLFS TSFNPGWASG ISATVIHGLL GMLVEGGADN VNQCFLEASR
301: FGSTELVRIL LQIAQRNSLD VDVDLALGFA SHYSKIETMD CLVEEGHAIA FLGPLMRAAE RGCMQVVQWF VKRGCREMEL CLALTAATSS SQVEVAAYLL
401: PHVPRPVLTA LSIEILKAAG ERSGGSLHGV EFLLKSDFLG DPAATYSVAD TIAKSEDESV PSDLKSFLQE QWSEAAFNQG LKESRENYMN FMRVLKLGES
501: AISLKDLPAP LRVAIAYMPL YRECVDAGGR LLSQKLRGQL VEAATQLEGF DVDTEEVKKG HHQLMTILEH HLPLFLVKAS LH

Arabidopsis Description

AT2G44090 protein [Source:UniProtKB/TrEMBL;Acc:O80579]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.