Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G44090.1 | CDY24170 | AT3G47620.1 | 21798944 |
| AT2G44090.1 | CDY36943 | AT3G47620.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G44090.1 | Thale cress | cytosol | 83.74 | 76.98 |
| CDY17887 | Canola | cytosol | 83.74 | 74.79 |
| CDX79783 | Canola | cytosol | 84.11 | 74.14 |
| GSMUA_Achr6P12560_001 | Banana | cytosol | 68.22 | 67.47 |
| CDY05963 | Canola | cytosol | 74.58 | 66.06 |
| CDX71861 | Canola | cytosol | 74.39 | 65.89 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 68.04 | 64.42 |
| KRH01853 | Soybean | cytosol | 71.4 | 63.14 |
| KRH51312 | Soybean | cytosol | 71.4 | 63.14 |
| PGSC0003DMT400016554 | Potato | cytosol | 72.9 | 62.0 |
| Solyc08g015780.2.1 | Tomato | cytosol | 73.46 | 61.89 |
| PGSC0003DMT400035669 | Potato | cytosol | 73.46 | 61.89 |
| Solyc12g017540.1.1 | Tomato | cytosol | 72.9 | 61.81 |
| GSMUA_Achr3P02760_001 | Banana | cytosol | 69.35 | 59.55 |
| Os11t0246900-01 | Rice | mitochondrion | 63.55 | 59.03 |
| GSMUA_Achr6P18250_001 | Banana | cytosol | 67.1 | 57.9 |
| HORVU5Hr1G007560.1 | Barley | cytosol | 24.86 | 57.58 |
| Os02t0562400-01 | Rice | cytosol, extracellular | 50.84 | 56.67 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.36 | 56.03 |
| EES09541 | Sorghum | nucleus | 63.36 | 54.33 |
| TraesCS4B01G087400.1 | Wheat | cytosol | 62.43 | 53.78 |
| TraesCS4D01G084700.1 | Wheat | cytosol | 62.43 | 53.78 |
| Zm00001d049019_P003 | Maize | cytosol | 62.24 | 53.54 |
| TraesCS4A01G229000.1 | Wheat | cytosol, extracellular, plasma membrane | 62.24 | 51.39 |
| HORVU4Hr1G014910.1 | Barley | mitochondrion | 63.36 | 48.78 |
| KXG30444 | Sorghum | cytosol | 52.34 | 47.54 |
| HORVU3Hr1G051770.2 | Barley | cytosol, mitochondrion | 26.36 | 42.22 |
| VIT_05s0094g01540.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 72.9 | 39.84 |
| Zm00001d016858_P001 | Maize | cytosol | 50.65 | 32.15 |
Protein Annotations
| EnsemblPlants:CDY23417 | EnsemblPlantsGene:GSBRNA2T00022026001 | Gene3D:1.25.40.20 | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | InterPro:IPR020683 |
| InterPro:IPR036770 | PANTHER:PTHR36024 | ProteinID:CDY23417 | ProteinID:CDY23417.1 | SEG:seg | SUPFAM:SSF48403 |
| UniParc:UPI0004EE9682 | UniProt:A0A078GE95 | MapMan:35.1 | : | : | : |
Description
BnaC04g49450DBnaC04g49450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GE95]
Coordinates
chrLK032143:-:348241..350434
Molecular Weight (calculated)
58777.5 Da
IEP (calculated)
5.748
GRAVY (calculated)
-0.006
Length
535 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKESVSDI VRDKKLNRQD RIELGRLFQG SVSSQDWELS ERMIHLADLQ TLNDLLCISL DSIWFLTTEG ELQGITGLIG KIISHGACDY TRATLRTSFL
101: ASCVSSCHSL TDTVTVMAQR LHERLQECDG DKVLKAEAGD KVQKFTEWAF KCIGFHSHSA RDKANQDSAA AAAEIQLQLS AFKTFLDLAG NNLSGKDFAE
201: AFDAACFPLT LFSTSFSPGW ASGISASVVH GLLGMLVEGG ADNVNQCFLE ASRFGSTELV RILLQIAQRN SLDVDVDLAL GFASHYNKIE TMDCLVEEGN
301: AVAFLSPLMR AAERGCVQVV EWFVKRGCRE MELCLALTAA TSSSRVEIAA YLLPHVPRPV LAALNAEILK AAGERSGGSF KGVEFLLKSD FLEDPVATYS
401: AADTVAKSED ESVPLELRSF LQEHWSEAAF KQGVKESRDN FMNFMRVLKI GESAICLKDL PAPLRVAIAY MPLYRGCVKA GGRLLSQKLR GQLVEAVKQL
501: QGFDVDTEEV YKGHHQLMAV LEHHLPIFLV KGSSH
101: ASCVSSCHSL TDTVTVMAQR LHERLQECDG DKVLKAEAGD KVQKFTEWAF KCIGFHSHSA RDKANQDSAA AAAEIQLQLS AFKTFLDLAG NNLSGKDFAE
201: AFDAACFPLT LFSTSFSPGW ASGISASVVH GLLGMLVEGG ADNVNQCFLE ASRFGSTELV RILLQIAQRN SLDVDVDLAL GFASHYNKIE TMDCLVEEGN
301: AVAFLSPLMR AAERGCVQVV EWFVKRGCRE MELCLALTAA TSSSRVEIAA YLLPHVPRPV LAALNAEILK AAGERSGGSF KGVEFLLKSD FLEDPVATYS
401: AADTVAKSED ESVPLELRSF LQEHWSEAAF KQGVKESRDN FMNFMRVLKI GESAICLKDL PAPLRVAIAY MPLYRGCVKA GGRLLSQKLR GQLVEAVKQL
501: QGFDVDTEEV YKGHHQLMAV LEHHLPIFLV KGSSH
001: MENDDMYPDE PVGSDLEPQE SDVVFARESP LVGIITQPTK CSGSTAKILK CRGLEQQKKL NRQDRIELGR LFQGAVSSQD WQLSERFIQL ADPQTLNDLL
101: CISLDSIWFL STEHELRGIT ELIAKIICHG AQDYTRATLR TSFLASCVSS CHSRTVSLAD TVTVMAQRLH ERLQECNGDE VLKAEAGAKV QKFTEWALKC
201: IGFHSRCQGP RDKANQDSAA EIQLQLSAFK MFLDLAGNHL SGKDFTEAFD AACFPLTLFS TSFNPGWASG ISATVIHGLL GMLVEGGADN VNQCFLEASR
301: FGSTELVRIL LQIAQRNSLD VDVDLALGFA SHYSKIETMD CLVEEGHAIA FLGPLMRAAE RGCMQVVQWF VKRGCREMEL CLALTAATSS SQVEVAAYLL
401: PHVPRPVLTA LSIEILKAAG ERSGGSLHGV EFLLKSDFLG DPAATYSVAD TIAKSEDESV PSDLKSFLQE QWSEAAFNQG LKESRENYMN FMRVLKLGES
501: AISLKDLPAP LRVAIAYMPL YRECVDAGGR LLSQKLRGQL VEAATQLEGF DVDTEEVKKG HHQLMTILEH HLPLFLVKAS LH
101: CISLDSIWFL STEHELRGIT ELIAKIICHG AQDYTRATLR TSFLASCVSS CHSRTVSLAD TVTVMAQRLH ERLQECNGDE VLKAEAGAKV QKFTEWALKC
201: IGFHSRCQGP RDKANQDSAA EIQLQLSAFK MFLDLAGNHL SGKDFTEAFD AACFPLTLFS TSFNPGWASG ISATVIHGLL GMLVEGGADN VNQCFLEASR
301: FGSTELVRIL LQIAQRNSLD VDVDLALGFA SHYSKIETMD CLVEEGHAIA FLGPLMRAAE RGCMQVVQWF VKRGCREMEL CLALTAATSS SQVEVAAYLL
401: PHVPRPVLTA LSIEILKAAG ERSGGSLHGV EFLLKSDFLG DPAATYSVAD TIAKSEDESV PSDLKSFLQE QWSEAAFNQG LKESRENYMN FMRVLKLGES
501: AISLKDLPAP LRVAIAYMPL YRECVDAGGR LLSQKLRGQL VEAATQLEGF DVDTEEVKKG HHQLMTILEH HLPLFLVKAS LH
Arabidopsis Description
AT2G44090 protein [Source:UniProtKB/TrEMBL;Acc:O80579]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.