CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY24170
CDY36943

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44090.1	CDY24170	AT3G47620.1	21798944
AT2G44090.1	CDY36943	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004804.1-P	Field mustard	cytosol	98.85	98.85
CDY17887	Canola	cytosol	94.56	95.83
AT2G44090.1	Thale cress	cytosol	81.38	84.88
CDY23417	Canola	cytosol	74.14	84.11
CDY05963	Canola	cytosol	73.15	73.51
CDX71861	Canola	cytosol	72.65	73.01
KRH01853	Soybean	cytosol	69.03	69.26
GSMUA_Achr6P12560_001	Banana	cytosol	61.61	69.13
KRH51312	Soybean	cytosol	68.7	68.93
PGSC0003DMT400016554	Potato	cytosol	71.17	68.68
Solyc12g017540.1.1	Tomato	cytosol	71.0	68.3
PGSC0003DMT400035669	Potato	cytosol	70.35	67.24
Solyc08g015780.2.1	Tomato	cytosol	70.18	67.09
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	61.78	66.37
GSMUA_Achr3P02760_001	Banana	cytosol	66.72	65.01
HORVU5Hr1G007560.1	Barley	cytosol	23.89	62.77
Os11t0246900-01	Rice	mitochondrion	58.32	61.46
GSMUA_Achr6P18250_001	Banana	cytosol	61.94	60.65
GSMUA_AchrUn_...	Banana	cytosol	59.31	59.5
Os02t0562400-01	Rice	cytosol, extracellular	45.96	58.12
EES09541	Sorghum	nucleus	59.64	58.01
Zm00001d049019_P003	Maize	cytosol	58.98	57.56
TraesCS4B01G087400.1	Wheat	cytosol	58.65	57.33
TraesCS4D01G084700.1	Wheat	cytosol	58.65	57.33
TraesCS4A01G229000.1	Wheat	cytosol, extracellular, plasma membrane	58.65	54.94
HORVU4Hr1G014910.1	Barley	mitochondrion	58.65	51.22
KXG30444	Sorghum	cytosol	48.6	50.08
HORVU3Hr1G051770.2	Barley	cytosol, mitochondrion	25.37	46.11
VIT_05s0094g01540.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	71.0	44.02
Zm00001d016858_P001	Maize	cytosol	48.11	34.64

Protein Annotations

EnsemblPlants:CDX79783	EnsemblPlantsGene:GSBRNA2T00132611001	Gene3D:1.25.40.20	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	InterPro:IPR020683
InterPro:IPR036770	PANTHER:PTHR36024	ProteinID:CDX79783	ProteinID:CDX79783.1	SEG:seg	SUPFAM:SSF48403
UniParc:UPI0004EE317A	MapMan:35.1	:	:	:	:

Description

BnaA05g03730D

Coordinates

chrLK031819:+:149784..152435

Molecular Weight (calculated)

66588.7 Da

IEP (calculated)

4.982

GRAVY (calculated)

-0.085

Length

607 amino acids

Sequence
(BLAST)

001: MEKESVSDDD GLYPDEPFGS EFETEEILQV EKGEGSGVVF AREAPLIGNQ PSEGFGSSTK KLKCSGDVDV LEMGSLGKEK KLSRQDRIEL GRLFQNATSS
101: QDWELSERMI DLADLQTLND LLCISLDSIW FLSTEGELRG ITGLIAKIIC HGAHDYTRAT LRTSFLASCV SSCRNRTVSL SDSVTVMAQR LHERLQECNG
201: DEVLKAEAST KVQKFTEWAL KCIGFHSRCQ GGARDKANQD SAAEIQLQLA AFKTFLDLAG NHLTGKDFTE AFDAACFPLT LFSTSFNPGW ASGISATVIH
301: GLLGMLVEGG ADNVNQCFLE ASRFGSTELV RILLQIAQRN SLDVDVDLAL GFASHYSKIE TMDCLVEEGH AMAFLGPLMR AAERGCMQVV EWFVKRGCRE
401: MELCLALTAA TSSSQVEIAA YLLPHVPRPV LTALSIEILK AAGERSDGSL YGVEFLLKSD FLGDPVATYS VADTIAKSED ESVPSELKTF LQEHWSEAAL
501: SQGVRESRDN FMNFMRVLKI GESAIRLKDL PGPLRVAVAY MPLYRECVKA GGRLLSQRLR GQLMEAVKQL QGIVVDTEEA CKGGHHHQLM AVLEHHLPLF
601: LVKASSH

Best Arabidopsis Sequence Match ( AT2G44090.5 )
(BLAST)

001: MENDDMYPDE PVGSDLEPQE SDVVFARESP LVGIITQPTK CSGSTAKILK CRGLEQQKKL NRQDRIELGR LFQGAVSSQD WQLSERFIQL ADPQTLNDLL
101: CISLDSIWFL STEHELRGIT ELIAKIICHG AQDYTRATLR TSFLASCVSS CHSRTVSLAD TVTVMAQRLH ERLQECNGDE VLKAEAGAKV QKFTEWALKC
201: IGFHSRCQGP RDKANQDSAA EIQLQLSAFK MFLDLAGNHL SGKDFTEAFD AACFPLTLFS TSFNPGWASG ISATVIHGLL GMLVEGGADN VNQCFLEASR
301: FGSTELVRIL LQIAQRNSLD VDVDLALGFA SHYSKIETMD CLVEEGHAIA FLGPLMRAAE RGCMQVVQWF VKRGCREMEL CLALTAATSS SQVEVAAYLL
401: PHVPRPVLTA LSIEILKAAG ERSGGSLHGV EFLLKSDFLG DPAATYSVAD TIAKSEDESV PSDLKSFLQE QWSEAAFNQG LKESRENYMN FMRVLKLGES
501: AISLKDLPAP LRVAIAYMPL YRECVDAGGR LLSQKLRGQL VEAATQLEGF DVDTEEVKKG HHQLMTILEH HLPLFLVKAS LH

Arabidopsis Description

AT2G44090 protein [Source:UniProtKB/TrEMBL;Acc:O80579]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.