Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23417 | Canola | cytosol | 76.98 | 83.74 |
| CDY17887 | Canola | cytosol | 84.54 | 82.14 |
| Bra004804.1-P | Field mustard | cytosol | 84.88 | 81.38 |
| CDX79783 | Canola | cytosol | 84.88 | 81.38 |
| AT3G59910.2 | Thale cress | cytosol | 77.84 | 74.14 |
| GSMUA_Achr6P12560_001 | Banana | cytosol | 65.46 | 70.43 |
| KRH51312 | Soybean | cytosol | 71.48 | 68.76 |
| KRH01853 | Soybean | cytosol | 71.13 | 68.43 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 66.15 | 68.14 |
| PGSC0003DMT400016554 | Potato | cytosol | 72.85 | 67.41 |
| PGSC0003DMT400035669 | Potato | cytosol | 73.37 | 67.24 |
| Solyc08g015780.2.1 | Tomato | cytosol | 73.02 | 66.93 |
| Solyc12g017540.1.1 | Tomato | cytosol | 72.34 | 66.72 |
| GSMUA_Achr3P02760_001 | Banana | cytosol | 69.42 | 64.85 |
| Os11t0246900-01 | Rice | mitochondrion | 61.34 | 61.98 |
| HORVU5Hr1G007560.1 | Barley | cytosol | 24.4 | 61.47 |
| GSMUA_Achr6P18250_001 | Banana | cytosol | 64.95 | 60.97 |
| GSMUA_AchrUn_... | Banana | cytosol | 61.34 | 59.01 |
| Os02t0562400-01 | Rice | cytosol, extracellular | 48.63 | 58.96 |
| TraesCS4D01G084700.1 | Wheat | cytosol | 61.68 | 57.81 |
| TraesCS4B01G087400.1 | Wheat | cytosol | 61.51 | 57.65 |
| Zm00001d049019_P003 | Maize | cytosol | 61.51 | 57.56 |
| EES09541 | Sorghum | nucleus | 61.34 | 57.21 |
| TraesCS4A01G229000.1 | Wheat | cytosol, extracellular, plasma membrane | 61.51 | 55.25 |
| HORVU4Hr1G014910.1 | Barley | mitochondrion | 61.51 | 51.51 |
| KXG30444 | Sorghum | cytosol | 50.69 | 50.08 |
| HORVU3Hr1G051770.2 | Barley | cytosol, mitochondrion | 25.95 | 45.21 |
| VIT_05s0094g01540.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 74.4 | 44.23 |
| Zm00001d016858_P001 | Maize | cytosol | 50.0 | 34.52 |
Protein Annotations
| Gene3D:1.25.40.20 | MapMan:35.1 | EntrezGene:819015 | UniProt:A0A178VYZ3 | ProteinID:AAC23416.1 | ProteinID:AEC10372.1 |
| ProteinID:AEC10373.1 | EMBL:AK317504 | ProteinID:ANM62631.1 | ArrayExpress:AT2G44090 | EnsemblPlantsGene:AT2G44090 | RefSeq:AT2G44090 |
| TAIR:AT2G44090 | RefSeq:AT2G44090-TAIR-G | EnsemblPlants:AT2G44090.1 | TAIR:AT2G44090.1 | EMBL:AY139798 | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | Unigene:At.19504 | GO:GO:0008150 | InterPro:IPR020683 | InterPro:IPR036770 | RefSeq:NP_001031537.1 |
| RefSeq:NP_001324774.1 | RefSeq:NP_566008.1 | UniProt:O80579 | ProteinID:OAP11076.1 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR36024 | SUPFAM:SSF48403 | UniParc:UPI000009CFBB | : | : |
Description
AT2G44090 protein [Source:UniProtKB/TrEMBL;Acc:O80579]
Coordinates
chr2:-:18238269..18241376
Molecular Weight (calculated)
64119.8 Da
IEP (calculated)
5.123
GRAVY (calculated)
-0.070
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: MENDDMYPDE PVGSDLEPQE SDVVFARESP LVGIITQPTK CSGSTAKILK CRGLEQQKKL NRQDRIELGR LFQGAVSSQD WQLSERFIQL ADPQTLNDLL
101: CISLDSIWFL STEHELRGIT ELIAKIICHG AQDYTRATLR TSFLASCVSS CHSRTVSLAD TVTVMAQRLH ERLQECNGDE VLKAEAGAKV QKFTEWALKC
201: IGFHSRCQGP RDKANQDSAA EIQLQLSAFK MFLDLAGNHL SGKDFTEAFD AACFPLTLFS TSFNPGWASG ISATVIHGLL GMLVEGGADN VNQCFLEASR
301: FGSTELVRIL LQIAQRNSLD VDVDLALGFA SHYSKIETMD CLVEEGHAIA FLGPLMRAAE RGCMQVVQWF VKRGCREMEL CLALTAATSS SQVEVAAYLL
401: PHVPRPVLTA LSIEILKAAG ERSGGSLHGV EFLLKSDFLG DPAATYSVAD TIAKSEDESV PSDLKSFLQE QWSEAAFNQG LKESRENYMN FMRVLKLGES
501: AISLKDLPAP LRVAIAYMPL YRECVDAGGR LLSQKLRGQL VEAATQLEGF DVDTEEVKKG HHQLMTILEH HLPLFLVKAS LH
101: CISLDSIWFL STEHELRGIT ELIAKIICHG AQDYTRATLR TSFLASCVSS CHSRTVSLAD TVTVMAQRLH ERLQECNGDE VLKAEAGAKV QKFTEWALKC
201: IGFHSRCQGP RDKANQDSAA EIQLQLSAFK MFLDLAGNHL SGKDFTEAFD AACFPLTLFS TSFNPGWASG ISATVIHGLL GMLVEGGADN VNQCFLEASR
301: FGSTELVRIL LQIAQRNSLD VDVDLALGFA SHYSKIETMD CLVEEGHAIA FLGPLMRAAE RGCMQVVQWF VKRGCREMEL CLALTAATSS SQVEVAAYLL
401: PHVPRPVLTA LSIEILKAAG ERSGGSLHGV EFLLKSDFLG DPAATYSVAD TIAKSEDESV PSDLKSFLQE QWSEAAFNQG LKESRENYMN FMRVLKLGES
501: AISLKDLPAP LRVAIAYMPL YRECVDAGGR LLSQKLRGQL VEAATQLEGF DVDTEEVKKG HHQLMTILEH HLPLFLVKAS LH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.