Factsheet for HORVU5Hr1G007560.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G075650.1
HORVU7Hr1G038130.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G44090.1	HORVU6Hr1G075650.1	AT3G47620.1	21798944
AT2G44090.1	HORVU7Hr1G038130.1	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G051770.2	Barley	cytosol, mitochondrion	79.22	54.79
Os11t0246900-01	Rice	mitochondrion	86.15	34.55
EES09541	Sorghum	nucleus	81.39	30.13
Zm00001d049019_P003	Maize	cytosol	80.95	30.06
HORVU4Hr1G014910.1	Barley	mitochondrion	89.18	29.64
GSMUA_Achr6P12560_001	Banana	cytosol	65.8	28.1
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	67.1	27.43
GSMUA_Achr3P02760_001	Banana	cytosol	70.13	26.0
GSMUA_AchrUn_...	Banana	cytosol	65.37	24.96
CDY23417	Canola	cytosol	57.58	24.86
KRH01853	Soybean	cytosol	64.07	24.46
PGSC0003DMT400035669	Potato	cytosol	67.1	24.41
Solyc08g015780.2.1	Tomato	cytosol	67.1	24.41
AT2G44090.1	Thale cress	cytosol	61.47	24.4
CDY17887	Canola	cytosol	63.2	24.37
KRH51312	Soybean	cytosol	63.64	24.3
PGSC0003DMT400016554	Potato	cytosol	65.8	24.17
Bra004804.1-P	Field mustard	cytosol	63.2	24.05
GSMUA_Achr6P18250_001	Banana	cytosol	64.5	24.03
CDX79783	Canola	cytosol	62.77	23.89
Solyc12g017540.1.1	Tomato	cytosol	64.5	23.61
AT3G59910.2	Thale cress	cytosol	62.34	23.57
CDY05963	Canola	cytosol	61.47	23.51
CDX71861	Canola	cytosol	61.47	23.51
Bra007492.1-P	Field mustard	cytosol	61.47	23.51
VIT_05s0094g01540.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	68.4	16.14

Protein Annotations

EnsemblPlants:HORVU5Hr1G007560.1

EnsemblPlantsGene:HORVU5Hr1G007560

PANTHER:PTHR36024

UniParc:UPI000B484BCF

UniProt:A0A287Q9I1

MapMan:35.1

Description

No Description!

Coordinates

chrchr5H:+:15301050..15302753

Molecular Weight (calculated)

25205.1 Da

IEP (calculated)

6.500

GRAVY (calculated)

0.099

Length

231 amino acids

Sequence
(BLAST)

001: MCVAVDAIWF LSDKEELYAI VALIKRMVSA GANDFTRVAL RTSFLASCVS ACRGRTTSLS DAVSFMGQKL HERLQESHGN EVLKAEASAK VHKFTEWALK
101: CIGLHSRVRE SKGRGNHGTI IEVQLQLSAC KTFLNIADND LTGKDFTEAF DAACFPLTLF SSTFDQGWSS GISATAIQGL LELFLESGAH NVNQCFLEAA
201: RYGSTELVRI LLQCISHAAA TISVEETQPV H

Best Arabidopsis Sequence Match ( AT2G44090.1 )
(BLAST)

001: MENDDMYPDE PVGSDLEPQE SDVVFARESP LVGIITQPTK CSGSTAKILK CRGLEQQKKL NRQDRIELGR LFQGAVSSQD WQLSERFIQL ADPQTLNDLL
101: CISLDSIWFL STEHELRGIT ELIAKIICHG AQDYTRATLR TSFLASCVSS CHSRTVSLAD TVTVMAQRLH ERLQECNGDE VLKAEAGAKV QKFTEWALKC
201: IGFHSRCQGP RDKANQDSAA EIQLQLSAFK MFLDLAGNHL SGKDFTEAFD AACFPLTLFS TSFNPGWASG ISATVIHGLL GMLVEGGADN VNQCFLEASR
301: FGSTELVRIL LQIAQRNSLD VDVDLALGFA SHYSKIETMD CLVEEGHAIA FLGPLMRAAE RGCMQVVQWF VKRGCREMEL CLALTAATSS SQVEVAAYLL
401: PHVPRPVLTA LSIEILKAAG ERSGGSLHGV EFLLKSDFLG DPAATYSVAD TIAKSEDESV PSDLKSFLQE QWSEAAFNQG LKESRENYMN FMRVLKLGES
501: AISLKDLPAP LRVAIAYMPL YRECVDAGGR LLSQKLRGQL VEAATQLEGF DVDTEEVKKG HHQLMTILEH HLPLFLVKAS LH

Arabidopsis Description

AT2G44090 protein [Source:UniProtKB/TrEMBL;Acc:O80579]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.