Factsheet for Os11t0615250-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72487	Canola	cytosol	40.54	24.06
Os11t0484400-01	Rice	cytosol, plasma membrane, plastid	45.95	9.79
Os12t0446900-01	Rice	cytosol	42.34	9.02
CDX89705	Canola	cytosol	41.44	8.95
AT2G16370.1	Thale cress	cytosol	41.44	8.86
Bra011543.1-P	Field mustard	cytosol	39.64	8.82
CDY45317	Canola	cytosol	38.74	8.65
Bra017662.1-P	Field mustard	cytosol	38.74	8.53
KRH29421	Soybean	cytosol	40.54	8.52
KRH60811	Soybean	nucleus	39.64	8.3
KRH24440	Soybean	cytosol, nucleus	39.64	8.3
Solyc01g109830.2.1	Tomato	cytosol	38.74	8.16
PGSC0003DMT400001937	Potato	cytosol	38.74	8.16
CDX69070	Canola	mitochondrion, plastid	39.64	8.0
CDY21464	Canola	cytosol	21.62	7.89
AT4G34570.1	Thale cress	mitochondrion	39.64	7.79
KRH51504	Soybean	nucleus	39.64	7.75
CDX75443	Canola	mitochondrion	39.64	7.73
CDY02264	Canola	cytosol	42.34	7.61
Bra013079.1-P	Field mustard	cytosol	42.34	7.61
AT2G21550.1	Thale cress	cytosol, plasma membrane, plastid	27.03	6.1
CDX83194	Canola	cytosol	21.62	5.61
Bra000581.1-P	Field mustard	cytosol	21.62	5.31

Protein Annotations

KEGG:00240+2.1.1.45	KEGG:00670+1.5.1.3+2.1.1.45	KEGG:00670+2.1.1.45	KEGG:00790+1.5.1.3	Gene3D:3.30.572.10	MapMan:6.3.1.2
MapMan:7.5.5	UniProt:A0A0P0Y4B5	ProteinID:BAT14855.1	InterPro:DHFR-TS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004146	GO:GO:0004799	GO:GO:0006139	GO:GO:0006231	GO:GO:0006730	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0032259	GO:GO:0055114
InterPro:IPR036926	EnsemblPlantsGene:Os11g0615250	EnsemblPlants:Os11t0615250-00	PFAM:PF00303	PRINTS:PR00108	PANTHER:PTHR11548
PANTHER:PTHR11548:SF7	SUPFAM:SSF55831	InterPro:Thymidate_synth/dCMP_Mease	InterPro:Thymidate_synth/dCMP_Mease_sf	InterPro:Thymidylate_synthase	UniParc:UPI0003938EA0

Description

Similar to Bifunctional dihydrofolate reductase-thymidylate synthase. (Os11t0615250-00)

Coordinates

chr11:+:23922536..23923746

Molecular Weight (calculated)

12870.9 Da

IEP (calculated)

7.202

GRAVY (calculated)

0.227

Length

111 amino acids

Sequence
(BLAST)

001: ITSMHADYTV QVFDQLMDVI DKIKNNPDDK RIILSSWNPL DLKKMTIPPC HICLHNFMSS VGSYHARCIN SLLIWDLVFH STLHHILFRR TEYMIVHVCG
101: MLPCTLLCDS V

Best Arabidopsis Sequence Match ( AT2G16370.2 )
(BLAST)

001: MATTTLNDSV TTTLASEPQR TYQVVVAATK EMGIGKDGKL PWNLPTDLKF FKDITLTTSD SSKKNAVVMG RKTWESIPIK YRPLSGRLNV VLTRSGGFDI
101: ANTENVVTCS SVDSALDLLA APPYCLSIER VFVIGGGDIL REALNRPSCD AIHLTEIDTS VDCDTFIPAI DTSVYQPWSS SFPVTENGLR FCFTTFVRVK
201: SSADESSDES NGSQSLQFDG KKFLFLPKMV FDQHEEFLYL NMVEDIISNG NVKNDRTGTG TLSKFGCQMK FNLRRSFPLL TTKRVFWRGV VEELLWFISG
301: STNAKVLQEK GIHIWDGNAS REYLDGIGLT EREEGDLGPV YGFQWRHFGA KYTDMHADYT GQGFDQLVDV IDKIKNNPDD RRIIMSAWNP SDLKLMALPP
401: CHMFAQVMPL YLLILLFLLQ

Arabidopsis Description

THY-1Bifunctional dihydrofolate reductase-thymidylate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q05762]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.