Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0615250-00 | Rice | cytosol | 24.06 | 40.54 |
| CDY45317 | Canola | cytosol | 95.19 | 35.81 |
| CDX69070 | Canola | mitochondrion, plastid | 95.19 | 32.36 |
| CDX89705 | Canola | cytosol | 88.77 | 32.3 |
| AT4G34570.1 | Thale cress | mitochondrion | 95.19 | 31.5 |
| CDX75443 | Canola | mitochondrion | 95.72 | 31.46 |
| KRH24440 | Soybean | cytosol, nucleus | 87.7 | 30.94 |
| KRH29421 | Soybean | cytosol | 87.17 | 30.87 |
| KRH60811 | Soybean | nucleus | 86.1 | 30.38 |
| CDY21464 | Canola | cytosol | 49.2 | 30.26 |
| VIT_18s0001g12940.t01 | Wine grape | cytosol | 79.68 | 29.68 |
| GSMUA_Achr2P14300_001 | Banana | cytosol | 79.68 | 29.5 |
| Solyc01g109830.2.1 | Tomato | cytosol | 82.35 | 29.22 |
| PGSC0003DMT400001937 | Potato | cytosol | 81.82 | 29.03 |
| Os11t0484400-01 | Rice | cytosol, plasma membrane, plastid | 79.68 | 28.6 |
| Zm00001d007318_P001 | Maize | cytosol | 79.14 | 28.3 |
| Os12t0446900-01 | Rice | cytosol | 78.61 | 28.21 |
| KRH51504 | Soybean | nucleus | 85.03 | 27.99 |
| TraesCS2B01G547000.1 | Wheat | plastid | 80.75 | 26.17 |
| CDY02264 | Canola | cytosol | 85.56 | 25.89 |
| TraesCS2A01G518600.1 | Wheat | mitochondrion, plastid | 79.68 | 25.87 |
| TraesCS2D01G520000.1 | Wheat | plastid | 79.68 | 25.87 |
| KXG28376 | Sorghum | mitochondrion, plastid | 80.21 | 25.77 |
| Zm00001d049188_P008 | Maize | mitochondrion | 80.21 | 25.77 |
| VIT_03s0038g04500.t01 | Wine grape | golgi | 83.42 | 24.76 |
| HORVU2Hr1G114640.8 | Barley | cytosol, plastid | 79.14 | 24.42 |
| CDX83194 | Canola | cytosol | 49.73 | 21.73 |
| VIT_18s0075g01010.t01 | Wine grape | cytosol, mitochondrion | 0.53 | 1.15 |
| Zm00001d030396_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d050448_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00240+2.1.1.45 | KEGG:00670+1.5.1.3+2.1.1.45 | KEGG:00670+2.1.1.45 | KEGG:00790+1.5.1.3 | Gene3D:3.30.572.10 | MapMan:6.3.1.2 |
| MapMan:7.5.5 | GO:A0A078C6F7 | EnsemblPlants:CDX72487 | ProteinID:CDX72487 | ProteinID:CDX72487.1 | InterPro:DHFR-TS |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004146 | GO:GO:0004799 | GO:GO:0006139 | GO:GO:0006231 |
| GO:GO:0006730 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00100015001 | InterPro:IPR036926 | PFAM:PF00303 | PRINTS:PR00108 | ScanProsite:PS00091 |
| PANTHER:PTHR11548 | PANTHER:PTHR11548:SF7 | MetaCyc:PWY-3841 | MetaCyc:PWY-7184 | MetaCyc:PWY-7187 | MetaCyc:PWY-7198 |
| MetaCyc:PWY-7199 | MetaCyc:PWY-7210 | SUPFAM:SSF55831 | TIGRFAMs:TIGR03284 | InterPro:Thymidate_synth/dCMP_Mease | InterPro:Thymidate_synth/dCMP_Mease_sf |
| InterPro:Thymidylate_synthase | InterPro:Thymidylate_synthase_AS | UniPathway:UPA00575 | UniParc:UPI0004EE0025 | : | : |
Description
BnaC07g45090D
Coordinates
chrLK031796:-:1533596..1534394
Molecular Weight (calculated)
21312.6 Da
IEP (calculated)
6.222
GRAVY (calculated)
-0.242
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTEREEGDL GPVYGFQWRH FGAKYTDMHA DYTGQGFDQL LDVINKIKNN PDDRRIIMSA WNPSDLKLMA LPPCHMFAQF FVANGELSCQ MYQRSADMGL
101: GVPFNIASYS LLSCILAHVC DLVPGDFIHV IGDAHVYKNH VRPLQEQLEN PPKPFPVLKI NTEKKHIDSF VAADFELIGY DPHKKYI
101: GVPFNIASYS LLSCILAHVC DLVPGDFIHV IGDAHVYKNH VRPLQEQLEN PPKPFPVLKI NTEKKHIDSF VAADFELIGY DPHKKYI
001: MATTTLNDSV TTTLASEPQR TYQVVVAATK EMGIGKDGKL PWNLPTDLKF FKDITLTTSD SSKKNAVVMG RKTWESIPIK YRPLSGRLNV VLTRSGGFDI
101: ANTENVVTCS SVDSALDLLA APPYCLSIER VFVIGGGDIL REALNRPSCD AIHLTEIDTS VDCDTFIPAI DTSVYQPWSS SFPVTENGLR FCFTTFVRVK
201: SSADESSDES NGSQSLQFDG KKFLFLPKMV FDQHEEFLYL NMVEDIISNG NVKNDRTGTG TLSKFGCQMK FNLRRSFPLL TTKRVFWRGV VEELLWFISG
301: STNAKVLQEK GIHIWDGNAS REYLDGIGLT EREEGDLGPV YGFQWRHFGA KYTDMHADYT GQGFDQLVDV IDKIKNNPDD RRIIMSAWNP SDLKLMALPP
401: CHMFAQFYVA EGELSCQMYQ RSADMGLGVP FNIASYSLLT CMLAHVCDLV PGDFIHVLGD AHVYKTHVRP LQEQLLNLPK PFPVMKINPE KKQIDSFVAS
501: DFDLTGYDPH KKIEMKMAV
101: ANTENVVTCS SVDSALDLLA APPYCLSIER VFVIGGGDIL REALNRPSCD AIHLTEIDTS VDCDTFIPAI DTSVYQPWSS SFPVTENGLR FCFTTFVRVK
201: SSADESSDES NGSQSLQFDG KKFLFLPKMV FDQHEEFLYL NMVEDIISNG NVKNDRTGTG TLSKFGCQMK FNLRRSFPLL TTKRVFWRGV VEELLWFISG
301: STNAKVLQEK GIHIWDGNAS REYLDGIGLT EREEGDLGPV YGFQWRHFGA KYTDMHADYT GQGFDQLVDV IDKIKNNPDD RRIIMSAWNP SDLKLMALPP
401: CHMFAQFYVA EGELSCQMYQ RSADMGLGVP FNIASYSLLT CMLAHVCDLV PGDFIHVLGD AHVYKTHVRP LQEQLLNLPK PFPVMKINPE KKQIDSFVAS
501: DFDLTGYDPH KKIEMKMAV
Arabidopsis Description
THY-1Bifunctional dihydrofolate reductase-thymidylate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q05762]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.