Factsheet for Zm00001d007318_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030396_P001	Maize	cytosol	52.39	96.14
Zm00001d050448_P001	Maize	cytosol	52.01	95.44
Os11t0484400-01	Rice	cytosol, plasma membrane, plastid	88.53	88.87
KXG28376	Sorghum	mitochondrion, plastid	95.79	86.08
Zm00001d049188_P008	Maize	mitochondrion	94.84	85.22
CDX72487	Canola	cytosol	28.3	79.14
CDX89705	Canola	cytosol	73.61	74.9
Bra011543.1-P	Field mustard	cytosol	71.13	74.55
VIT_18s0001g12940.t01	Wine grape	cytosol	71.13	74.1
KRH29421	Soybean	cytosol	74.57	73.86
KRH60811	Soybean	nucleus	74.76	73.77
KRH24440	Soybean	cytosol, nucleus	74.38	73.4
AT2G16370.1	Thale cress	cytosol	72.28	72.83
CDY45317	Canola	cytosol	68.64	72.23
Bra017662.1-P	Field mustard	cytosol	69.6	72.22
Solyc01g109830.2.1	Tomato	cytosol	72.47	71.92
PGSC0003DMT400001937	Potato	cytosol	71.13	70.59
KRH51504	Soybean	nucleus	76.1	70.07
CDX69070	Canola	mitochondrion, plastid	71.89	68.36
AT4G34570.1	Thale cress	mitochondrion	72.08	66.73
GSMUA_Achr2P14300_001	Banana	cytosol	63.48	65.74
CDX75443	Canola	mitochondrion	71.13	65.38
CDY02264	Canola	cytosol	72.28	61.16
Bra013079.1-P	Field mustard	cytosol	72.28	61.16
CDX83194	Canola	cytosol	46.46	56.78
Bra000581.1-P	Field mustard	cytosol	47.8	55.31
AT2G21550.1	Thale cress	cytosol, plasma membrane, plastid	52.01	55.28
CDY21464	Canola	cytosol	29.25	50.33

Protein Annotations

KEGG:00240+2.1.1.45	KEGG:00670+1.5.1.3	KEGG:00670+1.5.1.3+2.1.1.45	KEGG:00670+2.1.1.45	KEGG:00790+1.5.1.3	Gene3D:3.30.572.10
Gene3D:3.40.430.10	EntrezGene:541707	MapMan:6.3.1.2	MapMan:7.5.5	UniProt:A0A1D6F5H8	InterPro:DHFR-TS
InterPro:DHFR-like_dom_sf	InterPro:DHFR_CS	InterPro:DHFR_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004146
GO:GO:0004799	GO:GO:0006139	GO:GO:0006231	GO:GO:0006545	GO:GO:0006730	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009058	GO:GO:0009165	GO:GO:0009987	GO:GO:0016491
GO:GO:0016740	GO:GO:0032259	GO:GO:0046654	GO:GO:0055114	InterPro:IPR001796	InterPro:IPR024072
InterPro:IPR036926	HAMAP:MF_00008	ProteinID:ONM26533.1	ProteinID:ONM26537.1	ProteinID:ONM26538.1	ProteinID:ONM26540.1
ProteinID:ONM26541.1	ProteinID:ONM26542.1	ProteinID:ONM26543.1	ProteinID:ONM26544.1	ProteinID:ONM26545.1	ProteinID:ONM26549.1
PFAM:PF00186	PFAM:PF00303	PIRSF:PIRSF000389	PRINTS:PR00108	ScanProsite:PS00075	ScanProsite:PS00091
PFscan:PS51330	PANTHER:PTHR11548	PANTHER:PTHR11548:SF7	SUPFAM:SSF53597	SUPFAM:SSF55831	TIGRFAMs:TIGR03284
InterPro:Thymidate_synth/dCMP_Mease	InterPro:Thymidate_synth/dCMP_Mease_sf	InterPro:Thymidylate_synthase	InterPro:Thymidylate_synthase_AS	UniParc:UPI000221AA97	EnsemblPlantsGene:Zm00001d007318
EnsemblPlants:Zm00001d007318_P001	EnsemblPlants:Zm00001d007318_T001	SEG:seg	:	:	:

Description

Bifunctional dihydrofolate reductase-thymidylate synthase Dihydrofolate reductase Thymidylate synthase

Coordinates

chr2:+:228269951..228282169

Molecular Weight (calculated)

59169.1 Da

IEP (calculated)

6.836

GRAVY (calculated)

-0.264

Length

523 amino acids

Sequence
(BLAST)

001: MAMAAVLANG DSQGRPQRNY QVVVAGTRDM GIGKDGVLPW KLPGDLKFFK ELTLITSDPV KKNAVIMGRK TWESIPVKSR PLPGRLNVIL TRSGSFDFAT
101: VENVVICGSM ESALELLAST PYCLSIEKVF VIGGGQVLRE YLKGPACEAI HLTDIQSSIE CDTFIPPVDF SVFQPWYSSF PVIESNIRHS FVSFVRVRKS
201: VAETHESNGK ESTEVDTKND KFETENFSFL PKMVYDRHEE YQYLNLVEDI IRSGAQKNDR TGTGTLSKFG CQMRFNLRKN FPLLTTKRVF WRGVVEELLW
301: FISGSTNAKV LQEKGIHIWD GNASREYLNS VGLAHREEGD LGPIYGFQWR HFGAEYTDMH ADYTGKGFDQ LMDVIDKIKN DPDDRRIILS AWNPSDLKKM
401: ALPPCHMFAQ FYVENGELSC QMYQRSADMG LGVPFNIASY SLLTYMIAQV CDLSPGDFVH VIGDAHVYRN HVRALEEQIQ KMPKPFPILK INPSKKDIDS
501: FMASDFKLVG YDPHQKIEMK MAV

Best Arabidopsis Sequence Match ( AT4G34570.1 )
(BLAST)

001: MRCLQNSAKT LPLAFKSALL PLSQRWFCKF SPKPSSLTNI FKVSISTMAN TLNGNVIMTS KPQSTYQVVV AATKEMGIGK DGKLPWNLPT DLKFFKDLTL
101: STSDSAKKNA VVMGRKTWES IPKKYRPLSG RLNVVLSRSS GFDIANTENV VTCSSIDSAL DLLAAPPFSL SIEKVFVIGG GDILREALNK PSCEAIHITE
201: IDTSIDCDTF IPTVDTSAYQ PWCSSFPICE NGLRFSFTTH VRVKSSSAGE ASDESDGSKV LQVDWKKFSS VLPKMIFDRH EEYLYLNLVK EIISNGNLKD
301: DRTGTGTLSK FGCQMKFNLR RNFPLLTTKR VFWRGVVEEL LWFISGSTNA KVLQEKGIRI WDGNASRAYL DGIGLTEREE GDLGPVYGFQ WRHFGAKYTD
401: MHADYTGQGF DQLLDVINKI KNNPDDRRII MSAWNPSDLK LMALPPCHMF AQFYVANGEL SCQMYQRSAD MGLGVPFNIA SYSLLTCILA HVCDLVPGDF
501: IHVIGDAHVY KNHVRPLQEQ LENPPKPFPV LKINPEKKDI DSFVADDFEL IGYDPHKKID MKMAV

Arabidopsis Description

THY-2Bifunctional dihydrofolate reductase-thymidylate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q05763]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.