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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 3
  • extracellular 1
  • mitochondrion 2
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, peroxisome, plastid, vacuole
BaCelLo:nucleus
EpiLoc:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol, extracellular, mitochondrion, plastid, vacuole
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX72487 Canola cytosol 29.5 79.68
Os11t0484400-01 Rice cytosol, plasma membrane, plastid 65.54 63.53
Zm00001d007318_P001 Maize cytosol 65.74 63.48
Os12t0446900-01 Rice cytosol 64.36 62.38
VIT_18s0001g12940.t01 Wine grape cytosol 61.19 61.55
Bra011543.1-P Field mustard cytosol 60.2 60.92
CDX89705 Canola cytosol 61.58 60.51
KRH29421 Soybean cytosol 63.17 60.42
KRH24440 Soybean cytosol, nucleus 63.37 60.38
PGSC0003DMT400001937 Potato cytosol 62.77 60.15
AT2G16370.1 Thale cress cytosol 61.39 59.73
KRH60811 Soybean nucleus 61.98 59.06
Solyc01g109830.2.1 Tomato cytosol 61.58 59.01
Bra017662.1-P Field mustard cytosol 58.61 58.73
CDY45317 Canola cytosol 57.23 58.15
KXG28376 Sorghum mitochondrion, plastid 66.53 57.73
Zm00001d049188_P008 Maize mitochondrion 65.15 56.53
CDX69070 Canola mitochondrion, plastid 61.19 56.18
TraesCS2A01G518600.1 Wheat mitochondrion, plastid 63.96 56.08
TraesCS2D01G520000.1 Wheat plastid 63.96 56.08
TraesCS2B01G547000.1 Wheat plastid 63.76 55.81
KRH51504 Soybean nucleus 62.38 55.46
CDX75443 Canola mitochondrion 60.4 53.6
AT4G34570.1 Thale cress mitochondrion 59.6 53.27
HORVU2Hr1G114640.8 Barley cytosol, plastid 63.76 53.14
Zm00001d050448_P001 Maize cytosol 28.12 49.82
Zm00001d030396_P001 Maize cytosol 28.12 49.82
Bra013079.1-P Field mustard cytosol 60.0 49.03
CDY02264 Canola cytosol 59.8 48.87
Bra000581.1-P Field mustard cytosol 42.18 47.12
AT2G21550.1 Thale cress cytosol, plasma membrane, plastid 45.35 46.54
CDX83194 Canola cytosol 39.01 46.03
CDY21464 Canola cytosol 20.59 34.21
Protein Annotations
KEGG:00240+2.1.1.45KEGG:00670+1.5.1.3KEGG:00670+1.5.1.3+2.1.1.45KEGG:00670+2.1.1.45KEGG:00790+1.5.1.3Gene3D:3.30.572.10
Gene3D:3.40.430.10MapMan:6.3.1.2MapMan:7.5.5InterPro:DHFR-TSInterPro:DHFR-like_dom_sfInterPro:DHFR_CS
InterPro:DHFR_domGO:GO:0003674GO:GO:0003824GO:GO:0004146GO:GO:0004799GO:GO:0006139
GO:GO:0006231GO:GO:0006545GO:GO:0006730GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0009058GO:GO:0009165GO:GO:0009987GO:GO:0016491GO:GO:0016740GO:GO:0032259
GO:GO:0046654GO:GO:0055114EnsemblPlantsGene:GSMUA_Achr2G14300_001EnsemblPlants:GSMUA_Achr2P14300_001EnsemblPlants:GSMUA_Achr2T14300_001InterPro:IPR001796
InterPro:IPR024072InterPro:IPR036926UniProt:M0S7X1PFAM:PF00186PFAM:PF00303PIRSF:PIRSF000389
PRINTS:PR00108ScanProsite:PS00075ScanProsite:PS00091PFscan:PS51330PANTHER:PTHR11548PANTHER:PTHR11548:SF7
SUPFAM:SSF53597SUPFAM:SSF55831TIGRFAMs:TIGR03284InterPro:Thymidate_synth/dCMP_MeaseInterPro:Thymidate_synth/dCMP_Mease_sfInterPro:Thymidylate_synthase
InterPro:Thymidylate_synthase_ASUniParc:UPI000294B98FSEG:seg:::
Description
Bifunctional dihydrofolate reductase-thymidylate synthase [Source:GMGC_GENE;Acc:GSMUA_Achr2G14300_001]
Coordinates
chr2:+:16111858..16118466
Molecular Weight (calculated)
56935.0 Da
IEP (calculated)
6.502
GRAVY (calculated)
-0.109
Length
505 amino acids
Sequence
(BLAST)
001: MATDIYQNGS NGNAQHDPQR TYQVVVAATR DMGIGKDGNL PWKLPSDLKF FKEVTMTTSD PSKRNAVIMG RKTWESIPPR NRPLPGRLNV VLTRSGSFDI
101: ATAENILMCG SLNSALELLA ATPYCLSIER VFVIGGGQVL REALNAPGCE AIHLTDIETS FQCDTFIPPV DCSVFRPWYS SFPLLENSIR YSFVTYVRIS
201: LRLRGSCFYL SLFMKDMKNM HILGLSRISL QMVLERMIEQ GLGHYLNLVV RCGLICGDLF HCSQPREFFG EVSLKNSCGL LVVQQMQRFC REKAFIYGMA
301: MHQENTLTGM DFVGLTHREE GDLGPVYGFQ WRHFGAEYTD MHADYTGEGF DQLSAIIDKI KNDPDDRRMI LSAWNPSDLK KMALPPCHMF AQFYVENGEL
401: SCQMYQRSAD LGLGVPFNIA SYSLLTCMIA QVCDLLPGDF VHAIGDAHVY STHVRPLEEQ LQKQPKPFPV LKMNPLKKDI DSFVASDFEL VGYDPHSKIE
501: MKMAI
Best Arabidopsis Sequence Match ( AT2G16370.1 )
(BLAST)
001: MATTTLNDSV TTTLASEPQR TYQVVVAATK EMGIGKDGKL PWNLPTDLKF FKDITLTTSD SSKKNAVVMG RKTWESIPIK YRPLSGRLNV VLTRSGGFDI
101: ANTENVVTCS SVDSALDLLA APPYCLSIER VFVIGGGDIL REALNRPSCD AIHLTEIDTS VDCDTFIPAI DTSVYQPWSS SFPVTENGLR FCFTTFVRVK
201: SSADESSDES NGSQSLQFDG KKFLFLPKMV FDQHEEFLYL NMVEDIISNG NVKNDRTGTG TLSKFGCQMK FNLRRSFPLL TTKRVFWRGV VEELLWFISG
301: STNAKVLQEK GIHIWDGNAS REYLDGIGLT EREEGDLGPV YGFQWRHFGA KYTDMHADYT GQGFDQLVDV IDKIKNNPDD RRIIMSAWNP SDLKLMALPP
401: CHMFAQFYVA EGELSCQMYQ RSADMGLGVP FNIASYSLLT CMLAHVCDLV PGDFIHVLGD AHVYKTHVRP LQEQLLNLPK PFPVMKINPE KKQIDSFVAS
501: DFDLTGYDPH KKIEMKMAV
Arabidopsis Description
THY-1Bifunctional dihydrofolate reductase-thymidylate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q05762]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.