Factsheet for HORVU2Hr1G114640.8

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G518600.1	Wheat	mitochondrion, plastid	86.14	90.62
TraesCS2B01G547000.1	Wheat	plastid	86.14	90.47
TraesCS2D01G520000.1	Wheat	plastid	85.64	90.1
Os12t0446900-01	Rice	cytosol	71.29	82.92
CDX72487	Canola	cytosol	24.42	79.14
Bra011543.1-P	Field mustard	cytosol	60.4	73.35
CDX89705	Canola	cytosol	61.55	72.57
VIT_18s0001g12940.t01	Wine grape	cytosol	60.07	72.51
KRH60811	Soybean	nucleus	62.71	71.7
Bra017662.1-P	Field mustard	cytosol	59.57	71.63
KRH29421	Soybean	cytosol	62.38	71.59
AT2G16370.1	Thale cress	cytosol	61.06	71.29
CDY45317	Canola	cytosol	58.42	71.23
KRH24440	Soybean	cytosol, nucleus	61.88	70.75
Solyc01g109830.2.1	Tomato	cytosol	61.39	70.59
PGSC0003DMT400001937	Potato	cytosol	60.56	69.64
KRH51504	Soybean	nucleus	63.7	67.96
CDX69070	Canola	mitochondrion, plastid	61.22	67.45
AT4G34570.1	Thale cress	mitochondrion	61.06	65.49
CDX75443	Canola	mitochondrion	60.73	64.67
GSMUA_Achr2P14300_001	Banana	cytosol	53.14	63.76
Bra013079.1-P	Field mustard	cytosol	60.73	59.55
CDY02264	Canola	cytosol	60.4	59.22
CDX83194	Canola	cytosol	39.27	55.61
Bra000581.1-P	Field mustard	cytosol	41.25	55.31
AT2G21550.1	Thale cress	cytosol, plasma membrane, plastid	44.06	54.27
CDY21464	Canola	cytosol	25.25	50.33

Protein Annotations

KEGG:00240+2.1.1.45	KEGG:00670+1.5.1.3	KEGG:00670+1.5.1.3+2.1.1.45	KEGG:00670+2.1.1.45	KEGG:00790+1.5.1.3	Gene3D:3.30.572.10
Gene3D:3.40.430.10	MapMan:6.3.1.2	MapMan:7.5.5	UniProt:A0A287JIX6	InterPro:DHFR-TS	InterPro:DHFR-like_dom_sf
InterPro:DHFR_CS	InterPro:DHFR_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004146	GO:GO:0004799
GO:GO:0006139	GO:GO:0006231	GO:GO:0006730	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009058	GO:GO:0009165	GO:GO:0009987	GO:GO:0016491	GO:GO:0016740	GO:GO:0032259
GO:GO:0046654	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G114640	EnsemblPlants:HORVU2Hr1G114640.8	InterPro:IPR001796	InterPro:IPR024072
InterPro:IPR036926	HAMAP:MF_00008	PFAM:PF00186	PFAM:PF00303	PIRSF:PIRSF000389	PRINTS:PR00108
ScanProsite:PS00075	ScanProsite:PS00091	PFscan:PS51330	PANTHER:PTHR11548	PANTHER:PTHR11548:SF7	SUPFAM:SSF53597
SUPFAM:SSF55831	TIGRFAMs:TIGR03284	InterPro:Thymidate_synth/dCMP_Mease	InterPro:Thymidate_synth/dCMP_Mease_sf	InterPro:Thymidylate_synthase	InterPro:Thymidylate_synthase_AS
UniParc:UPI000B4739D5	SEG:seg	:	:	:	:

Description

Bifunctional dihydrofolate reductase-thymidylate synthase [Source:UniProtKB/TrEMBL;Acc:A0A287JIX6]

Coordinates

chrchr2H:+:732691141..732698514

Molecular Weight (calculated)

68413.0 Da

IEP (calculated)

9.518

GRAVY (calculated)

-0.438

Length

606 amino acids

Sequence
(BLAST)

001: LLGFARADFP PPPPENANHS RRLPPPTPAP HRRPTAASAR ARRRGSRRSS HRRPPRGLPG TRTTTISRWP RLKSLEAINK LKSSCFHQSR MMADVTNGNS
101: HCDIQRKYQV VVAATREMGI GKDGALPWKL PSDLKFFKDL TMATSDPSKK NAVIMGRKTW ESIPTKFRPL PGRLNVILTR SGSSDYAKAE NVVTCGSLDS
201: SLELLASAPY SSTIEKAFLI GGGQVLRESL NASACEAIHL TDIESTIECD TFIPPIDPLI FHPWYSSSPV VENNIRHSFA TFVRVRKSAE EANDPNVNDT
301: KKEKFEIQIF SFLPKMIFEK HDEYQYLNLV QDILRTGARK NDRTGTGTIS KFGCQMRFNL RKNFPLLTTK RVFWRGVLEE LLWFISGSTN AKVLQEKNIR
401: IWDGNASREY LDSIGLSQRE EGDLGPVYGF QWRHFGAEYS DMHADYTGKG FDQLADVINK IKNNPDDRRI ILSAWNPTDL KKMALPPCHM FAQFYVENGE
501: LSCQMYQRSA DMGLGVPFNI ASYSLLTCMI AQVCDLSPGE FVHVIGDAHV YSTHVQALEE QLQKQPKPFP ILKINPLKKD IDSFVASDFK LACYDPHQKI
601: EMKMAV

Best Arabidopsis Sequence Match ( AT2G16370.1 )
(BLAST)

001: MATTTLNDSV TTTLASEPQR TYQVVVAATK EMGIGKDGKL PWNLPTDLKF FKDITLTTSD SSKKNAVVMG RKTWESIPIK YRPLSGRLNV VLTRSGGFDI
101: ANTENVVTCS SVDSALDLLA APPYCLSIER VFVIGGGDIL REALNRPSCD AIHLTEIDTS VDCDTFIPAI DTSVYQPWSS SFPVTENGLR FCFTTFVRVK
201: SSADESSDES NGSQSLQFDG KKFLFLPKMV FDQHEEFLYL NMVEDIISNG NVKNDRTGTG TLSKFGCQMK FNLRRSFPLL TTKRVFWRGV VEELLWFISG
301: STNAKVLQEK GIHIWDGNAS REYLDGIGLT EREEGDLGPV YGFQWRHFGA KYTDMHADYT GQGFDQLVDV IDKIKNNPDD RRIIMSAWNP SDLKLMALPP
401: CHMFAQFYVA EGELSCQMYQ RSADMGLGVP FNIASYSLLT CMLAHVCDLV PGDFIHVLGD AHVYKTHVRP LQEQLLNLPK PFPVMKINPE KKQIDSFVAS
501: DFDLTGYDPH KKIEMKMAV

Arabidopsis Description

THY-1Bifunctional dihydrofolate reductase-thymidylate synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q05762]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.