Factsheet for Bra000581.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83194	Canola	cytosol	87.39	92.29
AT2G21550.1	Thale cress	cytosol, plasma membrane, plastid	76.99	70.73
VIT_18s0075g01010.t01	Wine grape	cytosol, mitochondrion	10.62	55.17
Bra011543.1-P	Field mustard	cytosol	57.52	52.1
Bra017662.1-P	Field mustard	cytosol	57.96	51.98
KRH24440	Soybean	cytosol, nucleus	58.19	49.62
KRH29421	Soybean	cytosol	57.74	49.43
KRH60811	Soybean	nucleus	57.74	49.25
PGSC0003DMT400001937	Potato	cytosol	56.86	48.77
Os12t0446900-01	Rice	cytosol	55.75	48.37
Solyc01g109830.2.1	Tomato	cytosol	56.19	48.2
Os11t0484400-01	Rice	cytosol, plasma membrane, plastid	55.53	48.18
Zm00001d030396_P001	Maize	cytosol	30.31	48.07
Zm00001d007318_P001	Maize	cytosol	55.31	47.8
Zm00001d050448_P001	Maize	cytosol	30.09	47.72
VIT_18s0001g12940.t01	Wine grape	cytosol	52.43	47.21
KRH51504	Soybean	nucleus	57.3	45.6
TraesCS2B01G547000.1	Wheat	plastid	55.09	43.15
TraesCS2A01G518600.1	Wheat	mitochondrion, plastid	54.87	43.06
TraesCS2D01G520000.1	Wheat	plastid	54.87	43.06
KXG28376	Sorghum	mitochondrion, plastid	55.31	42.96
Zm00001d049188_P008	Maize	mitochondrion	55.09	42.78
VIT_03s0038g04500.t01	Wine grape	golgi	59.51	42.7
Bra013079.1-P	Field mustard	cytosol	57.74	42.23
GSMUA_Achr2P14300_001	Banana	cytosol	47.12	42.18
HORVU2Hr1G114640.8	Barley	cytosol, plastid	55.31	41.25
Os11t0615250-00	Rice	cytosol	5.31	21.62

Protein Annotations

KEGG:00240+2.1.1.45	KEGG:00670+1.5.1.3	KEGG:00670+1.5.1.3+2.1.1.45	KEGG:00670+2.1.1.45	KEGG:00790+1.5.1.3	Gene3D:3.30.572.10
Gene3D:3.40.430.10	MapMan:6.3.1.2	MapMan:7.5.5	EnsemblPlantsGene:Bra000581	EnsemblPlants:Bra000581.1	EnsemblPlants:Bra000581.1-P
InterPro:DHFR-TS	InterPro:DHFR-like_dom_sf	InterPro:DHFR_CS	InterPro:DHFR_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004146	GO:GO:0004799	GO:GO:0006139	GO:GO:0006231	GO:GO:0006545	GO:GO:0006730
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009165	GO:GO:0009987	GO:GO:0016740
GO:GO:0032259	GO:GO:0046654	GO:GO:0055114	InterPro:IPR001796	InterPro:IPR024072	InterPro:IPR036926
UniProt:M4C8Q3	PFAM:PF00186	PFAM:PF00303	PRINTS:PR00108	ScanProsite:PS00075	PFscan:PS51330
PANTHER:PTHR11548	PANTHER:PTHR11548:SF7	SUPFAM:SSF53597	SUPFAM:SSF55831	TIGRFAMs:TIGR03284	InterPro:Thymidate_synth/dCMP_Mease
InterPro:Thymidate_synth/dCMP_Mease_sf	InterPro:Thymidylate_synthase	UniParc:UPI0002540133	:	:	:

Description

AT2G21550 (E=6e-203) | bifunctional dihydrofolate reductase-thymidylate synthase, putative / DHFR-TS, putative

Coordinates

chrA03:-:11887776..11890193

Molecular Weight (calculated)

50906.6 Da

IEP (calculated)

5.171

GRAVY (calculated)

-0.205

Length

452 amino acids

Sequence
(BLAST)

001: MEAQNAQRRS YQVVIAATRD MGIGIDMKLP WDLPNEFQFF QDVTSRTSDP RKRNATIMGR KSWEATPLEF RPLPDRLNVV LTRSNCHSIP TDDDNVMVCG
101: SMESALELLA KPPYSFSIEK VFFIGGGELL RHYMNAPSCD AIHLTEVDIT VPCDTFAPRV DTCLYHPWYS SLPVVENGIR YCFNTYVRRK DLIFGSGVEA
201: EQYSFLPKMV FERHEEFGYL NLVQNIISNG DMNDNNTLLS KFGCQKVFWV GVVEEILQLI SGSTYPKEKG INHIWESDKA KEYLDSFGVN ATEEDGDHPL
301: LTGLYWSYSD ASQEFNQISD VINKIKNNPH DRGITLSACK LSISPCQTFA QFYVANGELS CQIYQSSTEA SLGIPFSIAA YSLLTCIMAH VCDVVAGDFI
401: HLIGDAHVNT SHTKAIQRQL QISPKPFPIL KINPAKKKID HLEASDLDLL DI

Best Arabidopsis Sequence Match ( AT2G21550.2 )
(BLAST)

001: MASTGETICN NGQSAVSVTR RRSYQVVIAA TRDMGLGMDM KLPWDLPSEY QFFQDVTTRT SDPTKRNATI MGRKSWESTP LEIRPLPGRL NIVLTKSSCH
101: NIAIDENVLV SSSMESALEL LATEPYSLSI EKVFVIGGGE LLRNYMNASI CDAIHLTEID ISVPCDAFAP RVDTSLYRPW YSSFPVVENG IRYSFNTYVR
201: RKDAIVGSGE KKSVAESDLK EYSFLPKMVF ERHEEFGYLN LVQNIISSGD MNDNSTLSKF GCQMRFNLRK TFPLLTTKKI FWLGVVEEIL QLISGSNNPK
301: ENGSHIWDTD EAKEYLDSFG VNATEEDGDN PFLHGLHWKH CDASQEFSQL SDVINKIKNN PHDQRIMLAA CNPLDFKLSV SPCHTFTQFY VANGEVSCQI
401: YQSSTEASIG IPFSIATYSL LTCIIAHVCD LGAGDFIHVI GQAYINKAHV KAIQKQLQIS PKPFPILKIN PEKKKMDNFE ASDLELMRI

Arabidopsis Description

Bifunctional dihydrofolate reductase-thymidylate synthase [Source:UniProtKB/TrEMBL;Acc:Q9SIK4]
SUBAcon: [cytosol,plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.