Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400002011 | Potato | nucleus | 100.0 | 51.39 |
| PGSC0003DMT400002013 | Potato | nucleus | 99.32 | 51.22 |
| PGSC0003DMT400025959 | Potato | nucleus | 56.76 | 26.84 |
| PGSC0003DMT400041848 | Potato | nucleus | 8.78 | 16.46 |
| PGSC0003DMT400061283 | Potato | mitochondrion, nucleus | 4.73 | 4.14 |
| PGSC0003DMT400061511 | Potato | mitochondrion | 4.73 | 4.09 |
| PGSC0003DMT400010597 | Potato | cytosol, nucleus, plastid | 4.73 | 4.05 |
| PGSC0003DMT400078256 | Potato | mitochondrion, nucleus, plastid | 4.05 | 3.47 |
| PGSC0003DMT400065346 | Potato | plastid | 4.73 | 3.35 |
| PGSC0003DMT400046644 | Potato | nucleus, plastid | 4.05 | 3.14 |
| PGSC0003DMT400019410 | Potato | plastid | 3.38 | 2.53 |
| PGSC0003DMT400054637 | Potato | cytosol, nucleus, plastid | 2.7 | 2.48 |
| PGSC0003DMT400038248 | Potato | nucleus | 2.03 | 2.34 |
| PGSC0003DMT400065297 | Potato | plastid | 3.38 | 2.31 |
| PGSC0003DMT400002549 | Potato | plastid | 2.7 | 2.12 |
| PGSC0003DMT400078265 | Potato | cytosol, nucleus, plastid | 2.7 | 1.8 |
| PGSC0003DMT400069646 | Potato | plastid | 2.03 | 1.71 |
| PGSC0003DMT400052995 | Potato | plastid | 2.03 | 1.49 |
| PGSC0003DMT400074783 | Potato | mitochondrion | 2.7 | 1.46 |
| PGSC0003DMT400017805 | Potato | plastid | 1.35 | 1.19 |
| PGSC0003DMT400022286 | Potato | cytosol, mitochondrion, nucleus, plastid | 1.35 | 1.17 |
| PGSC0003DMT400032875 | Potato | plastid | 0.68 | 0.64 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400008972 | EnsemblPlantsGene:PGSC0003DMG400003496 | PANTHER:PTHR31301 | PANTHER:PTHR31301:SF22 | PGSC:PGSC0003DMG400003496 | SEG:seg |
| UniParc:UPI000296711B | UniProt:M0ZVD3 | MapMan:35.2 | : | : | : |
Description
Protein ASYMMETRIC LEAVES2 [Source:PGSC_GENE;Acc:PGSC0003DMG400003496]
Coordinates
chr00:+:39151377..39152216
Molecular Weight (calculated)
16919.7 Da
IEP (calculated)
4.739
GRAVY (calculated)
-1.101
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYNMQPMGL QQQLMMRDPQ QQQQQQNQQQ VIEAHQLAAV MAAREQEMMR TYEPQQFNNG YDSAGPVTAT GFHQMSSSVS PSLALASFDN DPYQIQQAQQ
101: EQHRGQVQVQ VQPHQLLQQQ QQLPQQPQTP QQQQRANSEE ERSIGPSC
101: EQHRGQVQVQ VQPHQLLQQQ QQLPQQPQTP QQQQRANSEE ERSIGPSC
001: MASTPCAACK LLRRKCTQEC VFAPYFPPTN PQKFIFVHRV FGASNVTKIL NDLPPDQRED TVNSLFYEAE ARIRDPIYGC VGLISFLQQY LKKIQQDLLT
101: AKEELVGYLG PDAVIPPPYL PPIGNNPPPN FMMSMEGMPP GVIPQGEPLM IREPNMSQQH HHQQPQDEQL QFIASDAQRM AAMMLERGDQ QGMFNGYGID
201: NNGSVTATGF NQMDVNDQGA GGSLSGPSLA LGSFGDAYQM GQETEHGHIN HDQLQTQLML QPPLQEGQEQ TEEGQFLMQP MGQENLHDEE EEEELEPPVK
301: WRMSENKEAS F
101: AKEELVGYLG PDAVIPPPYL PPIGNNPPPN FMMSMEGMPP GVIPQGEPLM IREPNMSQQH HHQQPQDEQL QFIASDAQRM AAMMLERGDQ QGMFNGYGID
201: NNGSVTATGF NQMDVNDQGA GGSLSGPSLA LGSFGDAYQM GQETEHGHIN HDQLQTQLML QPPLQEGQEQ TEEGQFLMQP MGQENLHDEE EEEELEPPVK
301: WRMSENKEAS F
Arabidopsis Description
LBD10LOB domain-containing protein 10 [Source:UniProtKB/Swiss-Prot;Acc:O64836]
SUBAcon: [nucleus,mitochondrion]
SUBAcon: [nucleus,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.