Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400002549 | Potato | plastid | 41.77 | 17.46 |
| PGSC0003DMT400008972 | Potato | cytosol | 16.46 | 8.78 |
| PGSC0003DMT400069646 | Potato | plastid | 10.13 | 4.57 |
| PGSC0003DMT400002013 | Potato | nucleus | 16.46 | 4.53 |
| PGSC0003DMT400002011 | Potato | nucleus | 16.46 | 4.51 |
| PGSC0003DMT400046644 | Potato | nucleus, plastid | 10.13 | 4.19 |
| PGSC0003DMT400025959 | Potato | nucleus | 16.46 | 4.15 |
| PGSC0003DMT400017805 | Potato | plastid | 7.59 | 3.57 |
| PGSC0003DMT400032875 | Potato | plastid | 3.8 | 1.91 |
| PGSC0003DMT400054637 | Potato | cytosol, nucleus, plastid | 3.8 | 1.86 |
| PGSC0003DMT400078256 | Potato | mitochondrion, nucleus, plastid | 3.8 | 1.73 |
| PGSC0003DMT400065297 | Potato | plastid | 3.8 | 1.39 |
| PGSC0003DMT400061283 | Potato | mitochondrion, nucleus | 2.53 | 1.18 |
| PGSC0003DMT400022286 | Potato | cytosol, mitochondrion, nucleus, plastid | 2.53 | 1.17 |
| PGSC0003DMT400061511 | Potato | mitochondrion | 2.53 | 1.17 |
| PGSC0003DMT400010597 | Potato | cytosol, nucleus, plastid | 2.53 | 1.16 |
| PGSC0003DMT400074783 | Potato | mitochondrion | 3.8 | 1.09 |
| PGSC0003DMT400052995 | Potato | plastid | 2.53 | 1.0 |
| PGSC0003DMT400078265 | Potato | cytosol, nucleus, plastid | 2.53 | 0.9 |
| PGSC0003DMT400038248 | Potato | nucleus | 1.27 | 0.78 |
| PGSC0003DMT400019410 | Potato | plastid | 1.27 | 0.51 |
| PGSC0003DMT400065346 | Potato | plastid | 1.27 | 0.48 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400041848 | EnsemblPlantsGene:PGSC0003DMG400016239 | PANTHER:PTHR31301 | PANTHER:PTHR31301:SF5 | PGSC:PGSC0003DMG400016239 | SEG:seg |
| UniParc:UPI0002964952 | UniProt:M1BC43 | MapMan:35.2 | : | : | : |
Description
Asymmetric leaves 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400016239]
Coordinates
chr11:-:3006693..3007166
Molecular Weight (calculated)
8593.7 Da
IEP (calculated)
7.321
GRAVY (calculated)
-1.029
Length
79 amino acids
Sequence
(BLAST)
(BLAST)
1: MAGSGGGGGG GRDHSHHLYH HQFFPRDQQQ QQHQNMIRAF EGHGSNNFDA SSLFIGQLSQ FQQPRAAGAD GHRTPVDPS
001: MASSSTNSPC AACKFLRRKC QPECVFAPYF PPDQPQKFAN VHKVFGASNV TKLLNELHPS QREDAVNSLA YEADMRLRDP VYGCVGVISL LQHQLRQLQI
101: DLSCAKSELS KYQSLGILAA THQSLGINLL AGAADGTATA VRDHYHHHQF FPREQMFGGL DVPAGNNYDG GILAIGQITQ FQQPRAAAGD DGRRTVDPS
101: DLSCAKSELS KYQSLGILAA THQSLGINLL AGAADGTATA VRDHYHHHQF FPREQMFGGL DVPAGNNYDG GILAIGQITQ FQQPRAAAGD DGRRTVDPS
Arabidopsis Description
AS2AS2 [Source:UniProtKB/TrEMBL;Acc:A0A178WIA0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.