Factsheet for Solyc09g031600.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g050550.2.1	Tomato	plastid	57.08	49.91
GSMUA_Achr8P21250_001	Banana	cytosol	57.08	49.36
GSMUA_Achr10P...	Banana	cytosol	52.85	49.21
GSMUA_Achr3P10000_001	Banana	mitochondrion	55.39	48.43
TraesCS1D01G223500.1	Wheat	cytosol, plastid	51.16	45.66
TraesCS1A01G221800.1	Wheat	cytosol, plastid	50.95	45.47
TraesCS1B01G235000.1	Wheat	cytosol, plastid	50.74	45.28
GSMUA_Achr11P...	Banana	nucleus	50.11	45.06
Os05t0346100-01	Rice	plasma membrane	51.37	45.0
Zm00001d038007_P001	Maize	extracellular	50.74	43.4
EES18029	Sorghum	cytosol	50.11	43.09
HORVU1Hr1G060480.2	Barley	plastid	50.95	41.06
OQU78173	Sorghum	cytosol	35.1	36.56
Os01t0827200-01	Rice	cytosol, extracellular	37.0	34.72
Zm00001d010604_P008	Maize	cytosol, plastid	36.79	34.12
TraesCS3B01G379800.1	Wheat	cytosol	36.36	33.66
TraesCS1B01G307500.1	Wheat	cytosol	36.15	33.08
TraesCS3D01G341500.1	Wheat	cytosol	35.73	33.07
TraesCS3A01G347900.1	Wheat	cytosol	35.52	32.88
OQU87773	Sorghum	cytosol	35.52	32.68
Zm00001d043022_P001	Maize	cytosol	35.1	32.49
TraesCS1D01G293200.1	Wheat	cytosol	34.67	31.84
TraesCS1A01G298000.1	Wheat	cytosol	34.67	31.78
Zm00001d038449_P001	Maize	cytosol	34.88	21.88
Solyc09g010130.2.1	Tomato	plastid	10.78	17.29
Solyc09g031590.2.1	Tomato	cytosol	0.42	5.88

Protein Annotations

Gene3D:1.20.1270.60	MapMan:22.5.5.3.6	Gene3D:3.30.1520.10	InterPro:AH/BAR_dom_sf	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0006810	GO:GO:0006897	GO:GO:0008150	GO:GO:0008289	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0016050	GO:GO:0019898	GO:GO:0035091	InterPro:IPR001683	InterPro:IPR027267
InterPro:IPR036871	UniProt:K4CSL7	PFAM:PF00787	PFAM:PF09325	PFscan:PS50195	PANTHER:PTHR10555
PANTHER:PTHR10555:SF201	InterPro:PX_dom_sf	InterPro:Phox	SMART:SM00312	SUPFAM:SSF64268	EnsemblPlantsGene:Solyc09g031600.2
EnsemblPlants:Solyc09g031600.2.1	UniParc:UPI000276C705	InterPro:Vps5_C	:	:	:

Description

No Description!

Coordinates

chr9:+:29624614..29626759

Molecular Weight (calculated)

53061.3 Da

IEP (calculated)

6.337

GRAVY (calculated)

-0.418

Length

473 amino acids

Sequence
(BLAST)

001: MMGKEDSMEN LSLEDDEKFT SISKSYSNYR SAMTCLSDSH HPLSPSIVDD SNDPLLVSSI QSSAIDDHDV EQFQNPTIIS PPLNLEYLNI TVSDPHKEIQ
101: ASPSIVPGTN AYVTYLITTQ TNLPDYGGTD FTVRRRFKDI VTLSERLSEG YRGYFIPPRP DKSIVESQVM QKQEFVEQRR LALEKYLHKL AAHPLIKKSD
201: ELRVFLQVDG KLPLPTTIDV ASRVLDGAVK LPKQLFGESG NLIVPQDVVH PAKGGRDLLR LLKELKQSVA NDLGASNSSI DEEDKDFLKN KERLHNLELQ
301: LSNASKQAES LVKAQQDMGD SIGELGLTFI KLMKFENERA TVNTQRERAA DMKNVATAAV KASRLYRELN SLTVKHLDIL HEHLSLMLGI HHAFSDRSSA
401: LLTVQTLISE LSSLNSRAEK LETATSKIFG GDKSRIRKLE ELKDSIRVTE DAKSCAIREY ERIKVFDIKP LCL

Best Arabidopsis Sequence Match ( AT5G58440.1 )
(BLAST)

001: MMGSENADGF EETNLNAQRD DMENLDLGVD GGDHPLKISD VNGDTSNSGY RSAMSTLSNV RDPLSPPPTV MIPADSDPLL APSSYEDFRS SFSSKPISSD
101: NSYIEPPSYA DVIFSPFDEN SDSEINGTED NSLHSQFSDS LSRSPSSSSS DYIKITVSNP QKEQEISNSI VGGNTYITYQ ITTRTNLPDF GGPSEFSVRR
201: RFRDVVTLAD RLAETYRGFC IPPRPDKSVV ESQVMQKQEF VEQRRVALEK YLRRLSAHPV IRNSDELKVF LQVQGKLPLP MSTDVASRML DGAVKLPKQL
301: FGEGGASAVP VTEVGQPARG GRDLLRLFKE LRQSVSNDWG GSKPPVVEED KEFLEKKEKM HDLEQQIINA SQQAESLVKA QQDMGETMGE LGLAFIKLTK
401: FENEEAVCNP QRTRANDMKN LATAAVKASR FYRELNSQTV KHLDTLHEYL GMMMAVQGAF ADRSSALLTV QTLLSELPSL QTRVEKLEAA SSKVFGGDKS
501: RIRKIEELKE TIKVTEDAKN VAIKGYERIK ENNRSEVERL DRERRADFMN MMKGFVVNQV GYAEKMGNVW AKVAEETSQY DREKQSS

Arabidopsis Description

SNX2ASNX2a [Source:UniProtKB/TrEMBL;Acc:A0A178UPE2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.