Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 2
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043022_P001 | Maize | cytosol | 84.24 | 84.74 |
| Os01t0827200-01 | Rice | cytosol, extracellular | 59.14 | 60.32 |
| TraesCS3D01G341500.1 | Wheat | cytosol | 59.92 | 60.27 |
| TraesCS3B01G379800.1 | Wheat | cytosol | 59.53 | 59.88 |
| TraesCS3A01G347900.1 | Wheat | cytosol | 59.34 | 59.69 |
| OQU78173 | Sorghum | cytosol | 48.44 | 54.85 |
| Solyc06g050550.2.1 | Tomato | plastid | 43.39 | 41.22 |
| Solyc09g031590.2.1 | Tomato | cytosol | 2.72 | 41.18 |
| PGSC0003DMT400061516 | Potato | cytosol | 43.19 | 41.04 |
| GSMUA_Achr11P... | Banana | nucleus | 41.83 | 40.87 |
| CDX81034 | Canola | cytosol | 39.49 | 40.85 |
| KRH14903 | Soybean | cytosol | 41.05 | 40.58 |
| CDY58875 | Canola | cytosol | 40.27 | 40.27 |
| KRH73242 | Soybean | cytosol | 41.05 | 40.27 |
| Bra005925.1-P | Field mustard | cytosol | 40.08 | 40.08 |
| CDX70009 | Canola | cytosol | 39.69 | 38.13 |
| VIT_06s0004g07430.t01 | Wine grape | cytosol | 41.25 | 38.13 |
| VIT_13s0067g01990.t01 | Wine grape | cytosol | 41.44 | 38.04 |
| CDX99005 | Canola | cytosol | 39.88 | 38.03 |
| Bra009291.1-P | Field mustard | cytosol | 39.69 | 37.99 |
| EES18029 | Sorghum | cytosol | 40.47 | 37.82 |
| KRH72755 | Soybean | cytosol, endoplasmic reticulum | 41.05 | 37.81 |
| KRH17110 | Soybean | cytosol | 41.25 | 37.79 |
| AT5G07120.1 | Thale cress | cytosol | 40.27 | 36.19 |
| CDY32985 | Canola | cytosol | 36.19 | 35.98 |
| Solyc09g031600.2.1 | Tomato | cytosol | 32.68 | 35.52 |
| Bra002651.1-P | Field mustard | cytosol | 38.33 | 35.43 |
| AT5G58440.1 | Thale cress | cytosol | 40.27 | 35.26 |
| CDY57386 | Canola | cytosol | 38.13 | 35.06 |
| EES03929 | Sorghum | plastid | 17.9 | 23.0 |
Protein Annotations
| Gene3D:1.20.1270.60 | MapMan:22.5.5.3.6 | Gene3D:3.30.1520.10 | UniProt:A0A1W0W088 | InterPro:AH/BAR_dom_sf | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 | GO:GO:0035091 | InterPro:IPR001683 | InterPro:IPR027267 |
| InterPro:IPR036871 | EnsemblPlants:OQU87773 | ProteinID:OQU87773 | ProteinID:OQU87773.1 | PFAM:PF00787 | PFAM:PF09325 |
| PFscan:PS50195 | PANTHER:PTHR10555 | PANTHER:PTHR10555:SF146 | InterPro:PX_dom_sf | InterPro:Phox | SMART:SM00312 |
| EnsemblPlantsGene:SORBI_3003G341400 | SUPFAM:SSF64268 | UniParc:UPI0009DC8DB0 | InterPro:Vps5_C | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:-:66413653..66418097
Molecular Weight (calculated)
56595.7 Da
IEP (calculated)
6.901
GRAVY (calculated)
-0.493
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEPSSPVS PVEDLDTLPL ESSSSSVGVA ATTDPLLRPP PPPSSTSSPT AGENHGVFLD EEDEDGVEDF TPPPAPHTAA AATKSREASP GFAEITVSEP
101: RKHAEPATGA VGVIPGSANY VSYLIATRVP DGGEFRVRRR FRDVVALADR LAETHRGLFV PARPDKSIVE GQVMQRHDFV NQRCVTIQRY LRRLAAHPVV
201: GRSPVLHAFL TEPSGIPTSD GESPRWSPEM SAATSMAAAT PVTPTKSGRD FFGVFKDLKQ TVTNGWVAVR PPPVEEEIDK KYLVHKAKLE DLEKHLVTAS
301: QQAEAFVKDY DDLRATTGFL GMSFIKLAKF EKEQATCSSQ KRRAADISNF ASAVVRTSRS QAKLNAEIVK HLGVIHEYME TMASVHNAFN ARSNALLRVQ
401: NLSAELYFLR TRAGKLESVS SRGMDQERPR DQKIEELKET VRATEDAKAH ALKELELIKE NNMNEIKRFN KERRQDLVEM LKGFVSDQAT YSDHFASIWT
501: KVAEETKGYA KSSS
101: RKHAEPATGA VGVIPGSANY VSYLIATRVP DGGEFRVRRR FRDVVALADR LAETHRGLFV PARPDKSIVE GQVMQRHDFV NQRCVTIQRY LRRLAAHPVV
201: GRSPVLHAFL TEPSGIPTSD GESPRWSPEM SAATSMAAAT PVTPTKSGRD FFGVFKDLKQ TVTNGWVAVR PPPVEEEIDK KYLVHKAKLE DLEKHLVTAS
301: QQAEAFVKDY DDLRATTGFL GMSFIKLAKF EKEQATCSSQ KRRAADISNF ASAVVRTSRS QAKLNAEIVK HLGVIHEYME TMASVHNAFN ARSNALLRVQ
401: NLSAELYFLR TRAGKLESVS SRGMDQERPR DQKIEELKET VRATEDAKAH ALKELELIKE NNMNEIKRFN KERRQDLVEM LKGFVSDQAT YSDHFASIWT
501: KVAEETKGYA KSSS
001: MMGSENDEES HLHSSKEEME KLFLREDGDP LTKSNVNGDK SNSNYRSAMS TLFDSRHPSI VVTPADSDPL FAPPSYYSES RSPRSKPNGG DRVSSYLEPP
101: SYADVIFSPF DDISEINGSE DGHSQSSDSL SRSPSSLSSD YIKITVSNPQ KEQEATNSMI PGGSTYITYQ ITTRTNLSDY GGSEFSVRRR FRDIVTLADR
201: LAESYRGFCI PPRPDKSIVE SQVMQKQEFV EQRRVALEKY LRRLVAHPVI RNSDELKVFL QAQGKLPLAT STDVASRMLD GAVKLPKQLF GEGGGASSVE
301: VVQPGRGGRD FLRMFKELRQ SVSNDWGGSK PPVVEEDKEF LEKKEKMYDL EQQIINASQQ AESLVKAQQD MGETMGELGL AFIKLTKFEN EEAVFNSQRA
401: RANDMKNLAT SAVKASRFYR ELNSQTVKHL DTLHDYLGLM MAVQGAFADR SSALLTVQTL LSELSSLEAR AEKLEVASSK VFGGDKSRIK KIEELKETIK
501: VTEDSKNVAI REYEQIKENN WSEVERLDRE RRADFLNMMK GFVANQVGYA EKIANVWTKV AEETRQYDRE SS
101: SYADVIFSPF DDISEINGSE DGHSQSSDSL SRSPSSLSSD YIKITVSNPQ KEQEATNSMI PGGSTYITYQ ITTRTNLSDY GGSEFSVRRR FRDIVTLADR
201: LAESYRGFCI PPRPDKSIVE SQVMQKQEFV EQRRVALEKY LRRLVAHPVI RNSDELKVFL QAQGKLPLAT STDVASRMLD GAVKLPKQLF GEGGGASSVE
301: VVQPGRGGRD FLRMFKELRQ SVSNDWGGSK PPVVEEDKEF LEKKEKMYDL EQQIINASQQ AESLVKAQQD MGETMGELGL AFIKLTKFEN EEAVFNSQRA
401: RANDMKNLAT SAVKASRFYR ELNSQTVKHL DTLHDYLGLM MAVQGAFADR SSALLTVQTL LSELSSLEAR AEKLEVASSK VFGGDKSRIK KIEELKETIK
501: VTEDSKNVAI REYEQIKENN WSEVERLDRE RRADFLNMMK GFVANQVGYA EKIANVWTKV AEETRQYDRE SS
Arabidopsis Description
SNX2BSorting nexin 2B [Source:UniProtKB/Swiss-Prot;Acc:B9DFS6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.