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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • peroxisome 1
  • plastid 2
  • cytosol 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU78173 Sorghum cytosol 47.88 79.52
Zm00001d010604_P008 Maize cytosol, plastid 51.72 76.47
TraesCS1B01G307500.1 Wheat cytosol 46.15 67.31
TraesCS1A01G298000.1 Wheat cytosol 45.89 67.05
TraesCS1D01G293200.1 Wheat cytosol 44.56 65.24
Zm00001d043022_P001 Maize cytosol 37.27 54.99
CDX81034 Canola cytosol 26.92 40.85
GSMUA_Achr11P... Banana nucleus 27.85 39.92
Bra005925.1-P Field mustard cytosol 26.39 38.72
Solyc06g050550.2.1 Tomato plastid 27.72 38.63
VIT_06s0004g07430.t01 Wine grape cytosol 28.38 38.49
PGSC0003DMT400061516 Potato cytosol 27.59 38.45
Solyc09g031590.2.1 Tomato cytosol 1.72 38.24
CDY58875 Canola cytosol 25.99 38.13
CDX70009 Canola cytosol 26.92 37.94
CDX99005 Canola cytosol 27.06 37.85
CDY32985 Canola cytosol 25.73 37.52
KRH14903 Soybean cytosol 25.86 37.5
KRH72755 Soybean cytosol, endoplasmic reticulum 27.59 37.28
Bra009291.1-P Field mustard cytosol 26.53 37.24
KRH73242 Soybean cytosol 25.73 37.02
KRH17110 Soybean cytosol 27.45 36.9
Zm00001d038007_P001 Maize extracellular 27.06 36.89
Bra002651.1-P Field mustard cytosol 27.06 36.69
CDY57386 Canola cytosol 27.19 36.67
VIT_13s0067g01990.t01 Wine grape cytosol 26.79 36.07
AT5G07120.1 Thale cress cytosol 26.92 35.49
Solyc09g031600.2.1 Tomato cytosol 21.88 34.88
AT5G58440.1 Thale cress cytosol 26.92 34.58
Zm00001d012286_P001 Maize cytosol 11.41 20.62
Zm00001d042761_P001 Maize mitochondrion 12.2 19.66
Protein Annotations
Gene3D:1.20.1270.60EntrezGene:100277081EntrezGene:100857058MapMan:22.5.5.3.6Gene3D:3.20.20.100Gene3D:3.30.1520.10
UniProt:A0A1D6M6E0InterPro:AH/BAR_dom_sfProteinID:AQK86649.1InterPro:Aldo/ket_reductase_CSInterPro:Aldo/keto_reductasencoils:Coil
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0008289
GO:GO:0016491GO:GO:0035091GO:GO:0055114InterPro:IPR001683InterPro:IPR027267InterPro:IPR036812
InterPro:IPR036871InterPro:NADP_OxRdtase_domInterPro:NADP_OxRdtase_dom_sfPFAM:PF00248PFAM:PF00787PFAM:PF09325
PRINTS:PR00069ScanProsite:PS00062PFscan:PS50195PANTHER:PTHR10555PANTHER:PTHR10555:SF146InterPro:PX_dom_sf
InterPro:PhoxSMART:SM00312SUPFAM:SSF51430SUPFAM:SSF64268UniParc:UPI00084551FCInterPro:Vps5_C
EnsemblPlantsGene:Zm00001d038449EnsemblPlants:Zm00001d038449_P001EnsemblPlants:Zm00001d038449_T001SEG:seg::
Description
Sorting nexin 2B
Coordinates
chr6:+:157427258..157434499
Molecular Weight (calculated)
83408.4 Da
IEP (calculated)
7.540
GRAVY (calculated)
-0.417
Length
754 amino acids
Sequence
(BLAST)
001: MMAAEPSPSV PSTAAEDMET LALDSSSSSA AATASASDPL LRPPTSPTAA ASDDPFVIDD FLDEDDFTAP PPSVAGPPPA VLGDAASPVF PKITVSDPKK
101: HAEPSGGGAA GVIPGSGSYF SYLITTRFAG GGGEVRVRRR FRDVVALADG LAAAHRGLFV PARPDKSVLE GQVLQRHNFV SQRCAALQRY LCRLAAHPIV
201: GQSPGLRTFL TEPGAIPAFQ SEAPRYWTTT VNAAAPMVQM KAGRDLFGMF KGLKQTMVNG MVATKPPPVE QETDTEFLAH KARFEDLQQQ LTTTSQQAEA
301: LVKAQDGYRE TTGHLGMTLI KLAKFEREQA TCNSLRRRSG EIHNFANSVL KMSRSQIKLN SEIVKHLGSI HEYLEMMISV HHAFTDRSNA LHYVQILSAD
401: LFSLHIRARR LESSSARDMG HEWSTYQKVE GLKETIRSAE AAKSDAVREY ESIKENNKIE IKRFDKERRH DFIEMLKGFV ITQVSYSDHF ANMWTKAGYR
501: HVDTAAQYGV EKEPSQRPKQ QVVTVCRKTS CVDQVGRGLK AAMEGGINRK DLFVTSKLWL KDGAHMPPEA GEVLEFDMEG VWREMEGLVK DGLVKDIGVC
601: NYTVAKLNRL MRSANVPPAV CQMEMHPGWK NDRIFEACKK HGIHVTAYSP LGSSEKNLAH DPLVEKVANK LDKTPGQVLL RWALQRGTSV IPKSTRDERI
701: KENIQVFGWE IPEEDFRALC GIKDEKRVLT GEELFVNKTH GPYKSATEVW DHED
Best Arabidopsis Sequence Match ( AT5G01670.1 )
(BLAST)
001: MAHATFTSEG QNMESFRLLS GHKIPAVGLG TWRSGSQAAH AVVTAIVEGG YRHIDTAWEY GDQREVGQGI KRAMHAGLER RDLFVTSKLW CTELSPERVR
101: PALQNTLKEL QLEYLDLYLI HWPIRLREGA SKPPKAGDVL DFDMEGVWRE MENLSKDSLV RNIGVCNFTV TKLNKLLGFA ELIPAVCQME MHPGWRNDRI
201: LEFCKKNEIH VTAYSPLGSQ EGGRDLIHDQ TVDRIAKKLN KTPGQILVKW GLQRGTSVIP KSLNPERIKE NIKVFDWVIP EQDFQALNSI TDQKRVIDGE
301: DLFVNKTEGP FRSVADLWDH ED
Arabidopsis Description
NAD(P)-linked oxidoreductase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4K9G7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.