Skip to main content
crop-pal logo
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • cytosol 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d039589_P136 Maize plasma membrane 93.99 94.23
Os01t0182600-03 Rice nucleus 90.1 91.81
TraesCS3B01G135400.1 Wheat cytosol, nucleus, plasma membrane 86.13 88.14
TraesCS3D01G118200.2 Wheat nucleus 85.96 88.12
TraesCS3A01G116300.1 Wheat cytosol, nucleus, plasma membrane 86.04 88.05
HORVU3Hr1G021150.2 Barley cytosol 18.44 87.2
HORVU3Hr1G021140.2 Barley plastid 68.19 82.5
GSMUA_Achr10P... Banana cytosol, nucleus, peroxisome 42.22 80.35
GSMUA_Achr7P09770_001 Banana cytosol 73.69 76.67
GSMUA_Achr10P... Banana cytosol 74.96 75.66
VIT_18s0157g00020.t01 Wine grape cytosol, peroxisome, plasma membrane 71.74 72.48
GSMUA_Achr10P... Banana cytosol, mitochondrion, nucleus, plastid 23.94 70.75
KRH35085 Soybean cytosol, nucleus, plasma membrane 68.44 68.73
KRG91704 Soybean cytosol 68.19 68.42
Solyc04g071990.2.1 Tomato cytosol 67.43 68.29
Bra024536.1-P Field mustard cytosol, nucleus, plasma membrane 67.17 67.81
KRH08640 Soybean cytosol 62.69 67.73
CDY21388 Canola cytosol, nucleus, plasma membrane 67.01 67.63
Solyc12g056650.1.1 Tomato nucleus 66.67 67.52
CDY04787 Canola cytosol, nucleus, plasma membrane 66.75 67.44
AT1G22770.1 Thale cress cytosol 66.84 67.35
PGSC0003DMT400048370 Potato nucleus, plasma membrane, plastid 49.32 66.02
PGSC0003DMT400002842 Potato plastid 3.3 34.82
Protein Annotations
EnsemblPlants:Zm00001d008826_P078EnsemblPlants:Zm00001d008826_T078EnsemblPlantsGene:Zm00001d008826EntrezGene:100147733GO:GO:0000003GO:GO:0007275
GO:GO:0008150GO:GO:0009628GO:GO:0009791GO:GO:2000028InterPro:GIGANTEAPANTHER:PTHR36319
PRINTS:PR02081ProteinID:AQK90772.1SEG:segUniParc:UPI000842D4BDUniProt:A0A1D6FFZ6MapMan:26.1.2.3.2
Description
gigantea1 gigantea1
Coordinates
chr8:-:21787290..21795409
Molecular Weight (calculated)
129486.0 Da
IEP (calculated)
6.714
GRAVY (calculated)
-0.119
Length
1182 amino acids
Sequence
(BLAST)
0001: MDELIVNFNK FLGQALELPS MSDSNVKWID GLQFTSLYWP PPLDAEQKQA QILAYVEYFG QFTADTDQFP EDIAQLIQSS YPSKENRLVD EVLATFVLHH
0101: PEHGHAVAHP ILSRIIDGTL CYDRHGPPFS SFISLFSHNS EQEYSEQWAL ACGEILRVLT HYNRPIFKVE RQHTEAECSS TSDQATSSDS TDKRSNNSPG
0201: NESDWKPLRP LTPWITDILL AAPLGIRSDY FRWCGGVMGK YAAGGELKPP TTACSRGSGK HPQLMPSTPR WAVANGAGVI LSVCDEEVAR YETANLTAAA
0301: VPALLLPPPT TPLDEHLVAG LPPLEPYARL FHRYYAIATP SATQRLLFGL LEAPPSWAPD ALDAAVQLVE LLRAAEDYAS GMRLPKNWMH LHFLRAIGTA
0401: MSMRAGIAAD TAAALLFRIL SQPTLLFPPL RHAEGVEVHH EPLGGYVSSY KKQLEVPASE ATIDATAQGI ASLLCAHGPD VEWRICTIWE AAYGLLPLSS
0501: SAVDLPEIVV AAPLQPPTLS WSLYLPLLKV FEYLPRGSPS EACLMRIFVA TVEAILRRTF PSETSEQSRK PRSQSKNLAV AELHTMIHSL FVESCASMDL
0601: ASRLLFVVLT VCVSHQALPG GSKRPTGSDN HSHEEATEHS RLTNGRSRCK KRQGPVATFD SYVLAAVCAL SCELQLFPFI TKNGSHSNLK DSMKIIISGK
0701: NNGMNNELHN SISSAILHTR RILGILEAVF SLKPSSVGTS WSYSSNEIVA AAMVAAHVSE LFRRSRPCLN ALSALMRCKW DAEISTRASS LYHLIDLHGK
0801: TVSSIVNKAE PLEAHLTLTP VKRDNQHHRE ESNTSSLDSV KLENKNGSTS HKKNGFSRPL LKCAEEVLLN GDVASTSGKS IASLQVEASD LANFLTMDRN
0901: GGYRGSQTLL RSVLSEKQEL CFSVVSLLWQ KLIASPEMQM SAESTSAHQG WRKVVDALCD VVSASPTKAS AAIVLQAEKD LQPWIARDDE QGQKMWRVNQ
1001: RIVKLIAELM RNHDSPEALV ILASASDLLL RATDGMLVDG EACTLPQLEL LEVTARAVHL IIEWGDSGLS VADGLSNLLK CRLSTTIRCL SHPSAHVRAL
1101: SMSVLRDILS NGSVNPNKTI QGEQQRNGIQ SPSYRCLAAG IINWQADVER CIEWEAHSRR ATGLTLAFLS AAAKELGCPL PS
Best Arabidopsis Sequence Match ( AT1G22770.1 )
(BLAST)
0001: MASSSSSERW IDGLQFSSLL WPPPRDPQQH KDQVVAYVEY FGQFTSEQFP DDIAELVRHQ YPSTEKRLLD DVLAMFVLHH PEHGHAVILP IISCLIDGSL
0101: VYSKEAHPFA SFISLVCPSS ENDYSEQWAL ACGEILRILT HYNRPIYKTE QQNGDTERNC LSKATTSGSP TSEPKAGSPT QHERKPLRPL SPWISDILLA
0201: APLGIRSDYF RWCSGVMGKY AAGELKPPTI ASRGSGKHPQ LMPSTPRWAV ANGAGVILSV CDDEVARYET ATLTAVAVPA LLLPPPTTSL DEHLVAGLPA
0301: LEPYARLFHR YYAIATPSAT QRLLLGLLEA PPSWAPDALD AAVQLVELLR AAEDYASGVR LPRNWMHLHF LRAIGIAMSM RAGVAADAAA ALLFRILSQP
0401: ALLFPPLSQV EGVEIQHAPI GGYSSNYRKQ IEVPAAEATI EATAQGIASM LCAHGPEVEW RICTIWEAAY GLIPLNSSAV DLPEIIVATP LQPPILSWNL
0501: YIPLLKVLEY LPRGSPSEAC LMKIFVATVE TILSRTFPPE SSRELTRKAR SSFTTRSATK NLAMSELRAM VHALFLESCA GVELASRLLF VVLTVCVSHE
0601: AQSSGSKRPR SEYASTTENI EANQPVSNNQ TANRKSRNVK GQGPVAAFDS YVLAAVCALA CEVQLYPMIS GGGNFSNSAV AGTITKPVKI NGSSKEYGAG
0701: IDSAISHTRR ILAILEALFS LKPSSVGTPW SYSSSEIVAA AMVAAHISEL FRRSKALTHA LSGLMRCKWD KEIHKRASSL YNLIDVHSKV VASIVDKAEP
0801: LEAYLKNTPV QKDSVTCLNW KQENTCASTT CFDTAVTSAS RTEMNPRGNH KYARHSDEGS GRPSEKGIKD FLLDASDLAN FLTADRLAGF YCGTQKLLRS
0901: VLAEKPELSF SVVSLLWHKL IAAPEIQPTA ESTSAQQGWR QVVDALCNVV SATPAKAAAA VVLQAERELQ PWIAKDDEEG QKMWKINQRI VKVLVELMRN
1001: HDRPESLVIL ASASDLLLRA TDGMLVDGEA CTLPQLELLE ATARAIQPVL AWGPSGLAVV DGLSNLLKCR LPATIRCLSH PSAHVRALST SVLRDIMNQS
1101: SIPIKVTPKL PTTEKNGMNS PSYRFFNAAS IDWKADIQNC LNWEAHSLLS TTMPTQFLDT AARELGCTIS LSQ
Arabidopsis Description
GIProtein GIGANTEA [Source:UniProtKB/Swiss-Prot;Acc:Q9SQI2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.