Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35085 | Soybean | cytosol, nucleus, plasma membrane | 82.14 | 81.65 |
| KRG91704 | Soybean | cytosol | 82.14 | 81.58 |
| Solyc04g071990.2.1 | Tomato | cytosol | 78.63 | 78.83 |
| KRH08640 | Soybean | cytosol | 72.99 | 78.06 |
| Solyc12g056650.1.1 | Tomato | nucleus | 76.92 | 77.12 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 40.85 | 76.97 |
| PGSC0003DMT400048370 | Potato | nucleus, plasma membrane, plastid | 57.44 | 76.1 |
| AT1G22770.1 | Thale cress | cytosol | 75.73 | 75.53 |
| Bra024536.1-P | Field mustard | cytosol, nucleus, plasma membrane | 74.27 | 74.21 |
| CDY21388 | Canola | cytosol, nucleus, plasma membrane | 74.02 | 73.95 |
| CDY04787 | Canola | cytosol, nucleus, plasma membrane | 73.85 | 73.85 |
| Os01t0182600-03 | Rice | nucleus | 72.65 | 73.28 |
| KXG31676 | Sorghum | nucleus | 72.56 | 73.06 |
| GSMUA_Achr7P09770_001 | Banana | cytosol | 70.94 | 73.06 |
| GSMUA_Achr10P... | Banana | cytosol | 72.39 | 72.33 |
| TraesCS3D01G118200.2 | Wheat | nucleus | 71.2 | 72.25 |
| TraesCS3B01G135400.1 | Wheat | cytosol, nucleus, plasma membrane | 71.28 | 72.21 |
| TraesCS3A01G116300.1 | Wheat | cytosol, nucleus, plasma membrane | 71.2 | 72.12 |
| Zm00001d008826_P078 | Maize | nucleus | 72.48 | 71.74 |
| Zm00001d039589_P136 | Maize | plasma membrane | 72.22 | 71.67 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 23.68 | 69.25 |
| HORVU3Hr1G021150.2 | Barley | cytosol | 14.53 | 68.0 |
| HORVU3Hr1G021140.2 | Barley | plastid | 56.32 | 67.45 |
| PGSC0003DMT400002842 | Potato | plastid | 4.44 | 46.43 |
Protein Annotations
| EntrezGene:100254197 | wikigene:100254197 | MapMan:26.1.2.3.2 | ProteinID:CCB47898 | ProteinID:CCB47898.1 | ncoils:Coil |
| UniProt:F6H6Q8 | EMBL:FN595244 | InterPro:GIGANTEA | GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0007275 | GO:GO:0007623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 |
| GO:GO:0009628 | GO:GO:0009637 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0010218 | GO:GO:0010378 |
| GO:GO:0042542 | GO:GO:0042752 | GO:GO:0048578 | GO:GO:0080167 | GO:GO:2000028 | EntrezGene:LOC100254197 |
| wikigene:LOC100254197 | PRINTS:PR02081 | PANTHER:PTHR36319 | TIGR:TC53515 | UniParc:UPI00019861AD | ArrayExpress:VIT_18s0157g00020 |
| EnsemblPlantsGene:VIT_18s0157g00020 | EnsemblPlants:VIT_18s0157g00020.t01 | unigene:Vvi.8881 | RefSeq:XP_002264755 | RefSeq:XP_002264755.1 | RefSeq:XP_010665061.1 |
| RefSeq:XP_010665062.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr18:-:18675807..18702086
Molecular Weight (calculated)
128139.0 Da
IEP (calculated)
6.642
GRAVY (calculated)
-0.037
Length
1170 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASSCERWID GLQFSSLFWP PPQDVQQRKA QITAYVDYFG QFTSEQFPED IAELIRSRYP SKEQRLFDDV LATFVLHHPE HGHAVVLPII SCIIDGTLVY
0101: DRCTPPFASF ISLVCPSSEN EYSEQWALAC GEILRILTHY NRPIYKVEHQ SSEADRSSSG RHATTSDSVD GKSSQGPLLQ NERKPSRPLS PWITDILLAA
0201: PLGIRSDYFR WCGGVMGKYA AGELKPPSTA STRGSGKHPQ LIPSTPRWAV ANGAGVILSV CDEEVARYET ATLTAAAVPA LLLPPPTTAL DEHLVAGLPA
0301: LEPYARLFHR YYAIATPSAT QRLLLGLLEA PPSWAPDALD AAVQLVELLR AAEDYASGMR LPRNWMHLHF LRAIGTAMSM RAGIAADAAA ALLFRVLSQP
0401: ALLFPPLRQV EGFEFQHEPL DGYISSYKKQ IEVPATEATI EATAQGIASM LCAHGPEVEW RICTIWEAAY GLIPLSSSAV DLPEIIVATP LQPPILSWNL
0501: YIPLLKVLEY LPRGSPSEAC LMKIFVATVE SILQRTFPAE SSRENIRKTR YLFGIGSASK NLAVAELRTM VHALFLESCA SVELASRLLF VVLTVCVSHE
0601: AAQQNGSKRP RGEDSHLSEE ITEDLSDASG NQRDTKTRKM KKQGPVAAFD SYVLAAVCAL ACELQLFPLI ARGTNHSASK DVQIRAKPAK LNGSSSEFRN
0701: SIDSAIRHTH RILAILEALF SLKPSSVGTS WSYSSNEIVA AAMVAAHVSE LFRRSKACMH ALSVLMRCKW DEEIYTRASS LYNLIDIHSK AVASIVNKAE
0801: PLEAHLIHAT VWKDSPGHKD GSKEDDCAST SCFKSVNPLL LHSEDSAYSK SLPQFEKAPH LNEGTGNSLG KGIASFPLDA SELANFLTMD RHIGFSCSAQ
0901: VLLRSVLAEK QELCFSVVSL LWHKLIAAPE TKPSAESTSA QQGWRQVVDA LCNVVSASPA KAATAVVLQA ERELQPWIAK DDDLGQKMWR INQRIVKLIV
1001: ELMRNHDRPE SLVILSSASD LLLRATDGML VDGEACTLPQ LELLEATARA VQLVLEWGES GLAVADGLSN LLKCRVPATI RCLSHPSAHV RALSTSVLRD
1101: VLQSGSIKPH IKQGGRNGIH SYQYVNLGII DWQADIEKCL TWEAHSRLAT GMTNQFLDVA AKELGCTISI
0101: DRCTPPFASF ISLVCPSSEN EYSEQWALAC GEILRILTHY NRPIYKVEHQ SSEADRSSSG RHATTSDSVD GKSSQGPLLQ NERKPSRPLS PWITDILLAA
0201: PLGIRSDYFR WCGGVMGKYA AGELKPPSTA STRGSGKHPQ LIPSTPRWAV ANGAGVILSV CDEEVARYET ATLTAAAVPA LLLPPPTTAL DEHLVAGLPA
0301: LEPYARLFHR YYAIATPSAT QRLLLGLLEA PPSWAPDALD AAVQLVELLR AAEDYASGMR LPRNWMHLHF LRAIGTAMSM RAGIAADAAA ALLFRVLSQP
0401: ALLFPPLRQV EGFEFQHEPL DGYISSYKKQ IEVPATEATI EATAQGIASM LCAHGPEVEW RICTIWEAAY GLIPLSSSAV DLPEIIVATP LQPPILSWNL
0501: YIPLLKVLEY LPRGSPSEAC LMKIFVATVE SILQRTFPAE SSRENIRKTR YLFGIGSASK NLAVAELRTM VHALFLESCA SVELASRLLF VVLTVCVSHE
0601: AAQQNGSKRP RGEDSHLSEE ITEDLSDASG NQRDTKTRKM KKQGPVAAFD SYVLAAVCAL ACELQLFPLI ARGTNHSASK DVQIRAKPAK LNGSSSEFRN
0701: SIDSAIRHTH RILAILEALF SLKPSSVGTS WSYSSNEIVA AAMVAAHVSE LFRRSKACMH ALSVLMRCKW DEEIYTRASS LYNLIDIHSK AVASIVNKAE
0801: PLEAHLIHAT VWKDSPGHKD GSKEDDCAST SCFKSVNPLL LHSEDSAYSK SLPQFEKAPH LNEGTGNSLG KGIASFPLDA SELANFLTMD RHIGFSCSAQ
0901: VLLRSVLAEK QELCFSVVSL LWHKLIAAPE TKPSAESTSA QQGWRQVVDA LCNVVSASPA KAATAVVLQA ERELQPWIAK DDDLGQKMWR INQRIVKLIV
1001: ELMRNHDRPE SLVILSSASD LLLRATDGML VDGEACTLPQ LELLEATARA VQLVLEWGES GLAVADGLSN LLKCRVPATI RCLSHPSAHV RALSTSVLRD
1101: VLQSGSIKPH IKQGGRNGIH SYQYVNLGII DWQADIEKCL TWEAHSRLAT GMTNQFLDVA AKELGCTISI
0001: MASSSSSERW IDGLQFSSLL WPPPRDPQQH KDQVVAYVEY FGQFTSEQFP DDIAELVRHQ YPSTEKRLLD DVLAMFVLHH PEHGHAVILP IISCLIDGSL
0101: VYSKEAHPFA SFISLVCPSS ENDYSEQWAL ACGEILRILT HYNRPIYKTE QQNGDTERNC LSKATTSGSP TSEPKAGSPT QHERKPLRPL SPWISDILLA
0201: APLGIRSDYF RWCSGVMGKY AAGELKPPTI ASRGSGKHPQ LMPSTPRWAV ANGAGVILSV CDDEVARYET ATLTAVAVPA LLLPPPTTSL DEHLVAGLPA
0301: LEPYARLFHR YYAIATPSAT QRLLLGLLEA PPSWAPDALD AAVQLVELLR AAEDYASGVR LPRNWMHLHF LRAIGIAMSM RAGVAADAAA ALLFRILSQP
0401: ALLFPPLSQV EGVEIQHAPI GGYSSNYRKQ IEVPAAEATI EATAQGIASM LCAHGPEVEW RICTIWEAAY GLIPLNSSAV DLPEIIVATP LQPPILSWNL
0501: YIPLLKVLEY LPRGSPSEAC LMKIFVATVE TILSRTFPPE SSRELTRKAR SSFTTRSATK NLAMSELRAM VHALFLESCA GVELASRLLF VVLTVCVSHE
0601: AQSSGSKRPR SEYASTTENI EANQPVSNNQ TANRKSRNVK GQGPVAAFDS YVLAAVCALA CEVQLYPMIS GGGNFSNSAV AGTITKPVKI NGSSKEYGAG
0701: IDSAISHTRR ILAILEALFS LKPSSVGTPW SYSSSEIVAA AMVAAHISEL FRRSKALTHA LSGLMRCKWD KEIHKRASSL YNLIDVHSKV VASIVDKAEP
0801: LEAYLKNTPV QKDSVTCLNW KQENTCASTT CFDTAVTSAS RTEMNPRGNH KYARHSDEGS GRPSEKGIKD FLLDASDLAN FLTADRLAGF YCGTQKLLRS
0901: VLAEKPELSF SVVSLLWHKL IAAPEIQPTA ESTSAQQGWR QVVDALCNVV SATPAKAAAA VVLQAERELQ PWIAKDDEEG QKMWKINQRI VKVLVELMRN
1001: HDRPESLVIL ASASDLLLRA TDGMLVDGEA CTLPQLELLE ATARAIQPVL AWGPSGLAVV DGLSNLLKCR LPATIRCLSH PSAHVRALST SVLRDIMNQS
1101: SIPIKVTPKL PTTEKNGMNS PSYRFFNAAS IDWKADIQNC LNWEAHSLLS TTMPTQFLDT AARELGCTIS LSQ
0101: VYSKEAHPFA SFISLVCPSS ENDYSEQWAL ACGEILRILT HYNRPIYKTE QQNGDTERNC LSKATTSGSP TSEPKAGSPT QHERKPLRPL SPWISDILLA
0201: APLGIRSDYF RWCSGVMGKY AAGELKPPTI ASRGSGKHPQ LMPSTPRWAV ANGAGVILSV CDDEVARYET ATLTAVAVPA LLLPPPTTSL DEHLVAGLPA
0301: LEPYARLFHR YYAIATPSAT QRLLLGLLEA PPSWAPDALD AAVQLVELLR AAEDYASGVR LPRNWMHLHF LRAIGIAMSM RAGVAADAAA ALLFRILSQP
0401: ALLFPPLSQV EGVEIQHAPI GGYSSNYRKQ IEVPAAEATI EATAQGIASM LCAHGPEVEW RICTIWEAAY GLIPLNSSAV DLPEIIVATP LQPPILSWNL
0501: YIPLLKVLEY LPRGSPSEAC LMKIFVATVE TILSRTFPPE SSRELTRKAR SSFTTRSATK NLAMSELRAM VHALFLESCA GVELASRLLF VVLTVCVSHE
0601: AQSSGSKRPR SEYASTTENI EANQPVSNNQ TANRKSRNVK GQGPVAAFDS YVLAAVCALA CEVQLYPMIS GGGNFSNSAV AGTITKPVKI NGSSKEYGAG
0701: IDSAISHTRR ILAILEALFS LKPSSVGTPW SYSSSEIVAA AMVAAHISEL FRRSKALTHA LSGLMRCKWD KEIHKRASSL YNLIDVHSKV VASIVDKAEP
0801: LEAYLKNTPV QKDSVTCLNW KQENTCASTT CFDTAVTSAS RTEMNPRGNH KYARHSDEGS GRPSEKGIKD FLLDASDLAN FLTADRLAGF YCGTQKLLRS
0901: VLAEKPELSF SVVSLLWHKL IAAPEIQPTA ESTSAQQGWR QVVDALCNVV SATPAKAAAA VVLQAERELQ PWIAKDDEEG QKMWKINQRI VKVLVELMRN
1001: HDRPESLVIL ASASDLLLRA TDGMLVDGEA CTLPQLELLE ATARAIQPVL AWGPSGLAVV DGLSNLLKCR LPATIRCLSH PSAHVRALST SVLRDIMNQS
1101: SIPIKVTPKL PTTEKNGMNS PSYRFFNAAS IDWKADIQNC LNWEAHSLLS TTMPTQFLDT AARELGCTIS LSQ
Arabidopsis Description
GIProtein GIGANTEA [Source:UniProtKB/Swiss-Prot;Acc:Q9SQI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.