Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- golgi 2
- extracellular 2
- cytosol 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001558.1-P | Field mustard | cytosol, mitochondrion, plasma membrane | 59.09 | 64.46 |
| CDX98477 | Canola | cytosol | 66.67 | 63.31 |
| CDX97586 | Canola | cytosol | 66.67 | 62.86 |
| CDX75777 | Canola | cytosol | 65.91 | 62.59 |
| VIT_19s0135g00070.t01 | Wine grape | plasma membrane | 45.45 | 41.96 |
| AT1G17080.1 | Thale cress | plasma membrane | 44.7 | 38.31 |
| Os01t0242900-01 | Rice | plasma membrane | 43.94 | 37.18 |
| TraesCS3A01G170100.1 | Wheat | cytosol, plasma membrane, plastid | 42.42 | 37.09 |
| KRH21829 | Soybean | plasma membrane | 44.7 | 36.88 |
| KXG31702 | Sorghum | peroxisome, plasma membrane, plastid | 40.15 | 36.3 |
| TraesCS3D01G171700.1 | Wheat | cytosol, plasma membrane, plastid | 40.15 | 35.1 |
| AT1G53560.1 | Thale cress | plasma membrane | 40.15 | 34.64 |
| GSMUA_Achr2P19710_001 | Banana | cytosol, mitochondrion, plasma membrane | 38.64 | 33.55 |
| Os05t0564800-01 | Rice | plasma membrane | 31.82 | 33.07 |
| KRH13519 | Soybean | cytosol | 41.67 | 31.79 |
| Zm00001d009578_P001 | Maize | plasma membrane | 39.39 | 30.95 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, plastid | 25.76 | 30.63 |
| PGSC0003DMT400022071 | Potato | cytosol, nucleus, plasma membrane | 37.88 | 30.49 |
| Solyc12g011440.1.1 | Tomato | cytosol, nucleus, plasma membrane | 37.88 | 30.49 |
| EES18686 | Sorghum | plasma membrane | 39.39 | 29.89 |
| EES03400 | Sorghum | cytosol, mitochondrion, plasma membrane | 40.15 | 28.49 |
| Zm00001d039619_P003 | Maize | cytosol | 31.06 | 28.47 |
| Zm00001d011536_P001 | Maize | plasma membrane | 38.64 | 27.87 |
| GSMUA_Achr7P25370_001 | Banana | cytosol, mitochondrion, plasma membrane | 37.12 | 27.68 |
| TraesCS1B01G427700.1 | Wheat | cytosol, peroxisome, plasma membrane | 38.64 | 27.27 |
| TraesCS3A01G247400.1 | Wheat | cytosol, peroxisome, plasma membrane | 38.64 | 27.27 |
| TraesCS3D01G244000.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.88 | 26.74 |
| Os01t0667100-01 | Rice | plasma membrane | 36.36 | 25.95 |
| TraesCS1D01G407300.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.88 | 25.77 |
| GSMUA_Achr6P13730_001 | Banana | plasma membrane | 40.91 | 25.12 |
| Solyc07g061970.2.1 | Tomato | cytosol | 35.61 | 24.1 |
| TraesCS1A01G399600.1 | Wheat | cytosol | 34.85 | 23.83 |
| PGSC0003DMT400018173 | Potato | cytosol, endoplasmic reticulum, nucleus | 33.33 | 19.82 |
Protein Annotations
| MapMan:35.2 | InterPro:50S_L18Ae/Ribosomal_L18a/L20 | EntrezGene:820686 | UniProt:A0A178VIQ3 | ProteinID:AEE75545.1 | ArrayExpress:AT3G14595 |
| EnsemblPlantsGene:AT3G14595 | RefSeq:AT3G14595 | TAIR:AT3G14595 | RefSeq:AT3G14595-TAIR-G | EnsemblPlants:AT3G14595.1 | TAIR:AT3G14595.1 |
| EMBL:BT025601 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0019538 | RefSeq:NP_566490.1 | ProteinID:OAP06247.1 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR10052 | PANTHER:PTHR10052:SF7 | UniProt:Q1H563 | TMHMM:TMhelix |
| UniParc:UPI00001633CE | SEG:seg | : | : | : | : |
Description
At3g14595 [Source:UniProtKB/TrEMBL;Acc:Q1H563]
Coordinates
chr3:+:4908731..4910521
Molecular Weight (calculated)
14469.3 Da
IEP (calculated)
8.838
GRAVY (calculated)
-0.033
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSGGDDKNR SVVTDHQHQQ QPPPPFQGVS NYPPQQQPPA TGYPQPAQPY AQGYVVNGVR PTEHGRCCGI GIGWVLFILG FFFALPWYIG FFLLLFSRNP
101: RERPGYIACA VGAVFATIIV IFGTVRGSGV WS
101: RERPGYIACA VGAVFATIIV IFGTVRGSGV WS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.