Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G14595.1 | Thale cress | cytosol, peroxisome, plasma membrane | 64.46 | 59.09 |
| TraesCS3A01G170100.1 | Wheat | cytosol, plasma membrane, plastid | 51.24 | 41.06 |
| VIT_19s0135g00070.t01 | Wine grape | plasma membrane | 47.93 | 40.56 |
| Bra039680.1-P | Field mustard | cytosol | 51.24 | 40.52 |
| TraesCS3D01G171700.1 | Wheat | cytosol, plasma membrane, plastid | 48.76 | 39.07 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, plastid | 35.54 | 38.74 |
| GSMUA_Achr2P19710_001 | Banana | cytosol, mitochondrion, plasma membrane | 47.93 | 38.16 |
| Bra040984.1-P | Field mustard | plasma membrane | 48.76 | 37.82 |
| Os01t0242900-01 | Rice | plasma membrane | 48.76 | 37.82 |
| Os05t0564800-01 | Rice | plasma membrane | 39.67 | 37.8 |
| KXG31702 | Sorghum | peroxisome, plasma membrane, plastid | 44.63 | 36.99 |
| KRH21829 | Soybean | plasma membrane | 47.11 | 35.62 |
| Bra026690.1-P | Field mustard | plasma membrane | 43.8 | 35.57 |
| Zm00001d009578_P001 | Maize | plasma membrane | 44.63 | 32.14 |
| Zm00001d039619_P003 | Maize | cytosol | 38.02 | 31.94 |
| PGSC0003DMT400022071 | Potato | cytosol, nucleus, plasma membrane | 42.98 | 31.71 |
| Solyc12g011440.1.1 | Tomato | cytosol, nucleus, plasma membrane | 42.98 | 31.71 |
| EES18686 | Sorghum | plasma membrane | 44.63 | 31.03 |
| TraesCS1B01G427700.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.28 | 29.95 |
| EES03400 | Sorghum | cytosol, mitochondrion, plasma membrane | 45.45 | 29.57 |
| TraesCS3A01G247400.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.45 | 29.41 |
| Os01t0667100-01 | Rice | plasma membrane | 44.63 | 29.19 |
| Zm00001d011536_P001 | Maize | plasma membrane | 43.8 | 28.96 |
| KRH13519 | Soybean | cytosol | 41.32 | 28.9 |
| TraesCS3D01G244000.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.63 | 28.88 |
| TraesCS1D01G407300.1 | Wheat | cytosol, peroxisome, plasma membrane | 45.45 | 28.35 |
| TraesCS1A01G399600.1 | Wheat | cytosol | 43.8 | 27.46 |
| Bra032348.1-P | Field mustard | cytosol | 38.02 | 27.22 |
| GSMUA_Achr7P25370_001 | Banana | cytosol, mitochondrion, plasma membrane | 39.67 | 27.12 |
| GSMUA_Achr6P13730_001 | Banana | plasma membrane | 47.11 | 26.51 |
| Bra016620.1-P | Field mustard | cytosol, endoplasmic reticulum, peroxisome | 48.76 | 23.41 |
| Solyc07g061970.2.1 | Tomato | cytosol | 35.54 | 22.05 |
| PGSC0003DMT400018173 | Potato | cytosol, endoplasmic reticulum, nucleus | 33.88 | 18.47 |
Protein Annotations
| EnsemblPlants:Bra001558.1 | EnsemblPlants:Bra001558.1-P | EnsemblPlantsGene:Bra001558 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:50S_L18Ae/Ribosomal_L18a/L20 | PANTHER:PTHR10052 | PANTHER:PTHR10052:SF7 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002540976 |
| UniProt:M4CBH8 | MapMan:35.2 | : | : | : | : |
Description
AT3G14595 (E=6e-021) | unknown protein
Coordinates
chrA03:+:17051452..17052662
Molecular Weight (calculated)
13187.9 Da
IEP (calculated)
8.312
GRAVY (calculated)
0.114
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSEDDKNR SVQPPPFHGA SNYPQQPPAG YPQPAQPYVS GYAVNGLTEE QRRLPCCGIG IGWLLFILGF FFGAIPWYIG FFLLLCSRNP REKPGYIACT
101: IGAVIATGFI VFGAIRGSGV W
101: IGAVIATGFI VFGAIRGSGV W
001: MTSGGDDKNR SVVTDHQHQQ QPPPPFQGVS NYPPQQQPPA TGYPQPAQPY AQGYVVNGVR PTEHGRCCGI GIGWVLFILG FFFALPWYIG FFLLLFSRNP
101: RERPGYIACA VGAVFATIIV IFGTVRGSGV WS
101: RERPGYIACA VGAVFATIIV IFGTVRGSGV WS
Arabidopsis Description
At3g14595 [Source:UniProtKB/TrEMBL;Acc:Q1H563]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.