Factsheet for AT4G34920.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17493	Canola	peroxisome	88.68	88.68
CDY58810	Canola	peroxisome	88.05	87.77
Bra034663.1-P	Field mustard	cytosol	87.74	87.74
VIT_03s0038g02090.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	70.75	70.75
PGSC0003DMT400004106	Potato	cytosol, nucleus, peroxisome	70.44	70.44
AT4G38690.1	Thale cress	cytosol	70.13	70.13
Solyc01g111260.2.1	Tomato	nucleus	69.5	69.5
Solyc01g111250.2.1	Tomato	cytosol, nucleus, peroxisome	69.5	69.5
Solyc10g055240.1.1	Tomato	cytosol	68.55	68.55
PGSC0003DMT400004107	Potato	cytosol, mitochondrion, plastid	69.5	68.42
PGSC0003DMT400059705	Potato	cytosol	67.61	67.61
KRH24254	Soybean	cytosol	66.04	66.25
AT4G34930.1	Thale cress	plastid	80.82	65.73
KRH51412	Soybean	cytosol	65.41	65.62
KRH29259	Soybean	plasma membrane	49.37	62.06
Zm00001d006231_P001	Maize	cytosol, mitochondrion	59.75	59.56
EER99259	Sorghum	cytosol	61.64	57.82
TraesCS5A01G328000.1	Wheat	cytosol	58.18	57.28
TraesCS5D01G333500.1	Wheat	cytosol	60.06	56.85
TraesCS5A01G327600.1	Wheat	cytosol	60.38	56.8
TraesCS5B01G327500.1	Wheat	cytosol	60.38	56.8
HORVU5Hr1G083100.1	Barley	plastid	57.55	56.66
TraesCS5B01G328000.1	Wheat	plastid	57.23	56.35
TraesCS5D01G333900.1	Wheat	plastid	56.92	56.04
PGSC0003DMT400059701	Potato	cytosol	36.48	55.5
HORVU5Hr1G045890.1	Barley	plastid	53.77	51.51
HORVU5Hr1G082990.1	Barley	plastid	26.1	21.78

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.2	EntrezGene:829644	UniProt:A0A178UYQ8	ProteinID:AEE86437.1	ArrayExpress:AT4G34920
EnsemblPlantsGene:AT4G34920	RefSeq:AT4G34920	TAIR:AT4G34920	RefSeq:AT4G34920-TAIR-G	EnsemblPlants:AT4G34920.1	TAIR:AT4G34920.1
EMBL:AY037233	ProteinID:CAB45453.1	ProteinID:CAB80209.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006629	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR000909	InterPro:IPR017946	RefSeq:NP_195218.1
ProteinID:OAO99038.1	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017
PO:PO:0025195	PO:PO:0025281	PFscan:PS50007	PANTHER:PTHR13593	PANTHER:PTHR13593:SF35	UniProt:Q9SW43
SMART:SM00148	SUPFAM:SSF51695	UniParc:UPI0000048A65	:	:	:

Description

AT4g34920/F11I11_160 [Source:UniProtKB/TrEMBL;Acc:Q9SW43]

Coordinates

chr4:+:16635504..16636983

Molecular Weight (calculated)

36402.3 Da

IEP (calculated)

5.887

GRAVY (calculated)

-0.421

Length

318 amino acids

Sequence
(BLAST)

001: MLSFFSNQID RQKDVSNEEK TLTNLEKSDG SQFPGDDYRP SDRKNWMAGL TLEKLTLNKI VWPGTHDSAT NDIGIPLISR PLAECQSLSI YEQLVLGTRV
101: LDIRVQEDRQ ICHGILTSYE IDVVIDDVIR FLSETHSEIV ILEIRTEFGH KDPPGFETYL ADKLGQFLIH QDDSLFNKPV SEILPKRVIC IWKPRESPKP
201: SRGGILWNSD YLKDNWIDTD LPWTKFQSNL KHLSEQQPTS SRKFFYRVEN TVTPQADNPV VWVKPVTDRI RKHARLFISQ CVSKGCGDKL QILSTDFIEG
301: DFVDACVGLT HARIEGKV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.