Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 2
- mitochondrion 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G34920.1 | KRH52586 | AT1G22920.1 | 21798944 |
| AT4G34920.1 | KRH61926 | AT1G22920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH24254 | Soybean | cytosol | 85.77 | 68.45 |
| VIT_03s0038g02090.t01 | Wine grape | cytosol, mitochondrion, nucleus, peroxisome | 72.73 | 57.86 |
| KRH51412 | Soybean | cytosol | 71.94 | 57.41 |
| Solyc01g111250.2.1 | Tomato | cytosol, nucleus, peroxisome | 70.36 | 55.97 |
| PGSC0003DMT400004106 | Potato | cytosol, nucleus, peroxisome | 69.96 | 55.66 |
| Solyc01g111260.2.1 | Tomato | nucleus | 69.17 | 55.03 |
| Bra010731.1-P | Field mustard | cytosol | 68.77 | 54.72 |
| CDX90289 | Canola | cytosol | 68.77 | 54.72 |
| AT4G38690.1 | Thale cress | cytosol | 67.98 | 54.09 |
| PGSC0003DMT400059705 | Potato | cytosol | 67.98 | 54.09 |
| CDY12097 | Canola | plasma membrane | 67.98 | 54.09 |
| PGSC0003DMT400004107 | Potato | cytosol, mitochondrion, plastid | 68.77 | 53.87 |
| Solyc10g055240.1.1 | Tomato | cytosol | 67.19 | 53.46 |
| AT4G34920.1 | Thale cress | cytosol | 62.06 | 49.37 |
| Zm00001d006231_P001 | Maize | cytosol, mitochondrion | 62.06 | 49.22 |
| EER99259 | Sorghum | cytosol | 64.82 | 48.38 |
| TraesCS5A01G328000.1 | Wheat | cytosol | 61.66 | 48.3 |
| CDY17493 | Canola | peroxisome | 60.47 | 48.11 |
| CDY58810 | Canola | peroxisome | 60.47 | 47.96 |
| TraesCS5B01G328000.1 | Wheat | plastid | 60.87 | 47.68 |
| Bra034663.1-P | Field mustard | cytosol | 59.68 | 47.48 |
| TraesCS5D01G333900.1 | Wheat | plastid | 60.47 | 47.37 |
| TraesCS5A01G327600.1 | Wheat | cytosol | 63.24 | 47.34 |
| TraesCS5D01G333500.1 | Wheat | cytosol | 62.85 | 47.32 |
| TraesCS5B01G327500.1 | Wheat | cytosol | 62.06 | 46.45 |
| HORVU5Hr1G083100.1 | Barley | plastid | 59.29 | 46.44 |
| PGSC0003DMT400059701 | Potato | cytosol | 36.36 | 44.02 |
| HORVU5Hr1G045890.1 | Barley | plastid | 53.75 | 40.96 |
| AT4G34930.1 | Thale cress | plastid | 60.47 | 39.13 |
| CDY58809 | Canola | peroxisome | 55.73 | 36.34 |
| CDX76304 | Canola | cytoskeleton, cytosol, peroxisome | 55.73 | 36.34 |
| CDY71207 | Canola | cytoskeleton, cytosol, peroxisome | 56.13 | 32.95 |
| CDY17494 | Canola | cytoskeleton, cytosol, peroxisome | 55.73 | 31.69 |
| Bra034664.1-P | Field mustard | cytosol | 44.27 | 30.11 |
| HORVU5Hr1G082990.1 | Barley | plastid | 18.97 | 12.6 |
Protein Annotations
| Gene3D:3.20.20.190 | MapMan:35.2 | EMBL:ACUP02006794 | EnsemblPlantsGene:GLYMA_11G105700 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006629 | GO:GO:0008081 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | UniProt:I1LIY6 |
| InterPro:IPR000909 | InterPro:IPR017946 | EnsemblPlants:KRH29259 | ProteinID:KRH29259 | ProteinID:KRH29259.1 | PFAM:PF00388 |
| InterPro:PLC-like_Pdiesterase_TIM-brl | InterPro:PLipase_C_PInositol-sp_X_dom | PFscan:PS50007 | PANTHER:PTHR13593 | PANTHER:PTHR13593:SF35 | SUPFAM:SSF51695 |
| UniParc:UPI00023CBD59 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:8024828..8026836
Molecular Weight (calculated)
28850.6 Da
IEP (calculated)
6.245
GRAVY (calculated)
-0.235
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MILQPIRLAS HASLGLLLND NPCPSTSSLC WGQRVIDIRV QEDRKVCHGV LVTYSIDVVI KDVKKFLSET QSEIIILEVR TEFGHEDPPE FNKYLEEQLG
101: DYLVPHDENV FEKTIAEVLP KRVICVWKPI KSPQPKTGSP LWSAGYLRDN WINTDLPSTK FESNMKHLSE QQPVTSRKYF YRVENIVTPV ADNPVLCVKP
201: VTERTHGFAR LFMSQCFSKG YADRLQIFST DFIDQDFVDA CVGLTCARVE GRA
101: DYLVPHDENV FEKTIAEVLP KRVICVWKPI KSPQPKTGSP LWSAGYLRDN WINTDLPSTK FESNMKHLSE QQPVTSRKYF YRVENIVTPV ADNPVLCVKP
201: VTERTHGFAR LFMSQCFSKG YADRLQIFST DFIDQDFVDA CVGLTCARVE GRA
001: MGSHLSKQLE RRKAISTEKK ALTDLEKSCG CEFPGCDYMP SDRKNWMAGV GPEKLHINKI VWPGTHDSAT NKIGIRFVSR PFAKCQSLSI YNQLVAGTRV
101: LDIRVQEDRR VCHGILKTYS VDVVLADLKR FLSETESEIV ILEIRTEFGH EDPPEFDKYL VEQLGEHLIH QDDHVFSKTV AELLPKRVIC VWKPRKSPQP
201: KHGDPLWSAG YLKDNWIDTD LPSTKFESNI KHLSQQQPAT SRKFFYRVEN TVTPQPDNPI MCVKPVTKRI HCYAKVFIIE CVKRGCADKL QIFSTDFIDN
301: EFVDACVGLT FARAEGKA
101: LDIRVQEDRR VCHGILKTYS VDVVLADLKR FLSETESEIV ILEIRTEFGH EDPPEFDKYL VEQLGEHLIH QDDHVFSKTV AELLPKRVIC VWKPRKSPQP
201: KHGDPLWSAG YLKDNWIDTD LPSTKFESNI KHLSQQQPAT SRKFFYRVEN TVTPQPDNPI MCVKPVTKRI HCYAKVFIIE CVKRGCADKL QIFSTDFIDN
301: EFVDACVGLT FARAEGKA
Arabidopsis Description
AT4g38690/F20M13_250 [Source:UniProtKB/TrEMBL;Acc:Q9SZP6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.