Factsheet for HORVU5Hr1G045890.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	plastid
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G018470.1
HORVU0Hr1G025410.1
HORVU1Hr1G008160.1
HORVU2Hr1G056160.5
HORVU2Hr1G067660.1
HORVU2Hr1G112000.1
HORVU3Hr1G021300.1
HORVU3Hr1G054660.1
HORVU3Hr1G113750.1
HORVU4Hr1G047410.2
HORVU4Hr1G048730.1
HORVU6Hr1G023630.1
HORVU7Hr1G078010.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34920.1	HORVU0Hr1G018470.1	AT1G22920.1	21798944
AT4G34920.1	HORVU0Hr1G025410.1	AT1G22920.1	21798944
AT4G34920.1	HORVU1Hr1G008160.1	AT1G22920.1	21798944
AT4G34920.1	HORVU2Hr1G056160.5	AT1G22920.1	21798944
AT4G34920.1	HORVU2Hr1G067660.1	AT1G22920.1	21798944
AT4G34920.1	HORVU2Hr1G112000.1	AT1G22920.1	21798944
AT4G34920.1	HORVU3Hr1G021300.1	AT1G22920.1	21798944
AT4G34920.1	HORVU3Hr1G054660.1	AT1G22920.1	21798944
AT4G34920.1	HORVU3Hr1G113750.1	AT1G22920.1	21798944
AT4G34920.1	HORVU4Hr1G047410.2	AT1G22920.1	21798944
AT4G34920.1	HORVU4Hr1G048730.1	AT1G22920.1	21798944
AT4G34920.1	HORVU6Hr1G023630.1	AT1G22920.1	21798944
AT4G34920.1	HORVU7Hr1G078010.1	AT1G22920.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G083100.1	Barley	plastid	91.27	93.81
TraesCS5B01G328000.1	Wheat	plastid	87.95	90.4
TraesCS5D01G333900.1	Wheat	plastid	87.65	90.09
TraesCS5A01G328000.1	Wheat	cytosol	85.84	88.24
Zm00001d006231_P001	Maize	cytosol, mitochondrion	68.07	70.85
EER99259	Sorghum	cytosol	65.96	64.6
KRH51412	Soybean	cytosol	56.02	58.68
CDX90289	Canola	cytosol	55.12	57.55
CDY12097	Canola	plasma membrane	55.12	57.55
Bra010731.1-P	Field mustard	cytosol	55.12	57.55
KRH24254	Soybean	cytosol	54.22	56.78
AT4G38690.1	Thale cress	cytosol	53.61	55.97
Solyc01g111260.2.1	Tomato	nucleus	53.61	55.97
PGSC0003DMT400059705	Potato	cytosol	53.61	55.97
Solyc01g111250.2.1	Tomato	cytosol, nucleus, peroxisome	53.31	55.66
PGSC0003DMT400004106	Potato	cytosol, nucleus, peroxisome	53.31	55.66
VIT_03s0038g02090.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	52.71	55.03
PGSC0003DMT400004107	Potato	cytosol, mitochondrion, plastid	53.31	54.8
Solyc10g055240.1.1	Tomato	cytosol	52.11	54.4
AT4G34920.1	Thale cress	cytosol	51.51	53.77
KRH29259	Soybean	plasma membrane	40.96	53.75
CDY17493	Canola	peroxisome	50.9	53.14
CDY58810	Canola	peroxisome	50.6	52.66
Bra034663.1-P	Field mustard	cytosol	50.0	52.2
PGSC0003DMT400059701	Potato	cytosol	30.72	48.8
CDX76304	Canola	cytoskeleton, cytosol, peroxisome	48.49	41.49
CDY58809	Canola	peroxisome	48.19	41.24
AT4G34930.1	Thale cress	plastid	48.19	40.92
Bra034664.1-P	Field mustard	cytosol	44.88	40.05
CDY71207	Canola	cytoskeleton, cytosol, peroxisome	48.8	37.59
CDY17494	Canola	cytoskeleton, cytosol, peroxisome	48.49	36.18
HORVU5Hr1G082990.1	Barley	plastid	35.24	30.71

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.2	UniProt:A0A287R1D4	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:HORVU5Hr1G045890	EnsemblPlants:HORVU5Hr1G045890.1
InterPro:IPR000909	InterPro:IPR017946	PFAM:PF00388	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	PFscan:PS50007
PANTHER:PTHR13593	PANTHER:PTHR13593:SF35	SMART:SM00148	SUPFAM:SSF51695	UniParc:UPI000B47D5EC	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:355715102..355716098

Molecular Weight (calculated)

37101.7 Da

IEP (calculated)

11.529

GRAVY (calculated)

-0.470

Length

332 amino acids

Sequence
(BLAST)

001: MAAIGAFFSG QVNRVKDVAS QQQALARRLS ASGQDFPGSG HRPADRKTWM AELGPERLRV HQVVWPGTHN SATAEIGVPF ITRPFAQCQS LSVYDQLATG
101: CRLLDVRVQK DRRVCHGPLV ASYTVDVVID DVRRFLAETV AEVLVLEVRT EFGHEDPPEF AKYLAERLGE HLIPQDDAVF RRTVAELPPR RVICVWKPRN
201: SPAPARGGPL WSAGYLRDNW INTDLPEKKL DGNLASLGQQ PDPAAARRHL YRVENTLTPQ TDNPVLLVEP VTRRIHRFAR FFIAQAFARG LGGKLQVLST
301: DXXXXXAVPR LHRRRLRRRL RRRHQGPRRR RR

Best Arabidopsis Sequence Match ( AT4G38690.1 )
(BLAST)

001: MGSHLSKQLE RRKAISTEKK ALTDLEKSCG CEFPGCDYMP SDRKNWMAGV GPEKLHINKI VWPGTHDSAT NKIGIRFVSR PFAKCQSLSI YNQLVAGTRV
101: LDIRVQEDRR VCHGILKTYS VDVVLADLKR FLSETESEIV ILEIRTEFGH EDPPEFDKYL VEQLGEHLIH QDDHVFSKTV AELLPKRVIC VWKPRKSPQP
201: KHGDPLWSAG YLKDNWIDTD LPSTKFESNI KHLSQQQPAT SRKFFYRVEN TVTPQPDNPI MCVKPVTKRI HCYAKVFIIE CVKRGCADKL QIFSTDFIDN
301: EFVDACVGLT FARAEGKA

Arabidopsis Description

AT4g38690/F20M13_250 [Source:UniProtKB/TrEMBL;Acc:Q9SZP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.