Factsheet for Bra010731.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
plasma membrane 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90289	Canola	cytosol	100.0	100.0
AT4G38690.1	Thale cress	cytosol	94.03	94.03
VIT_03s0038g02090.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	78.62	78.62
PGSC0003DMT400004106	Potato	cytosol, nucleus, peroxisome	75.79	75.79
KRH51412	Soybean	cytosol	75.16	75.39
Solyc01g111260.2.1	Tomato	nucleus	75.16	75.16
KRH24254	Soybean	cytosol	74.53	74.76
Solyc01g111250.2.1	Tomato	cytosol, nucleus, peroxisome	73.58	73.58
PGSC0003DMT400059705	Potato	cytosol	72.64	72.64
PGSC0003DMT400004107	Potato	cytosol, mitochondrion, plastid	72.96	71.83
Solyc10g055240.1.1	Tomato	cytosol	71.7	71.7
KRH29259	Soybean	plasma membrane	54.72	68.77
Bra034663.1-P	Field mustard	cytosol	67.61	67.61
Zm00001d006231_P001	Maize	cytosol, mitochondrion	67.61	67.4
EER99259	Sorghum	cytosol	71.38	66.96
TraesCS5D01G333500.1	Wheat	cytosol	68.87	65.18
TraesCS5B01G327500.1	Wheat	cytosol	68.87	64.79
TraesCS5A01G327600.1	Wheat	cytosol	68.55	64.5
TraesCS5A01G328000.1	Wheat	cytosol	63.21	62.23
TraesCS5B01G328000.1	Wheat	plastid	63.21	62.23
TraesCS5D01G333900.1	Wheat	plastid	62.26	61.3
HORVU5Hr1G083100.1	Barley	plastid	61.64	60.68
PGSC0003DMT400059701	Potato	cytosol	37.42	56.94
HORVU5Hr1G045890.1	Barley	plastid	57.55	55.12
Bra034664.1-P	Field mustard	cytosol	51.57	44.09
HORVU5Hr1G082990.1	Barley	plastid	29.25	24.41

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.2	EnsemblPlantsGene:Bra010731	EnsemblPlants:Bra010731.1	EnsemblPlants:Bra010731.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:IPR000909	InterPro:IPR017946	UniProt:M4D2M8	PFAM:PF00388	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom
PFscan:PS50007	PANTHER:PTHR13593	PANTHER:PTHR13593:SF35	SMART:SM00148	SUPFAM:SSF51695	UniParc:UPI0002546B51

Description

AT4G38690 (E=4e-180) | 1-phosphatidylinositol phosphodiesterase-related

Coordinates

chrA08:+:16163237..16164193

Molecular Weight (calculated)

36080.3 Da

IEP (calculated)

8.210

GRAVY (calculated)

-0.388

Length

318 amino acids

Sequence
(BLAST)

001: MGTHLSKQLE RRKAISTEKK ALADLQQSCG CEFPGCDYTP SDRKTWMAGV GPDKLHINKI VWPGTHDSAT NKIGIRFVSR PFAQCQSLSI YNQLVAGTRV
101: LDIRVQEDRR VCHGILKTYS VDVVLTDLKR FLSETESEIV ILEIRTEFGH EDPPEFDKYL VEQLGDHLIH QDDGVFGKTV AELLPKRVIC VWKPRKSPQP
201: KRGDPLWSAG YLKDNWIDTD LPSTKFESNL KHLSQQQPAA SRKFFYRVEN TVTPQPDNPI LCVKPVTNRI HCYAKVFIIE CVKRGCADKL QIFSTDFIDK
301: DFVDACVGLT FARAEGKA

Best Arabidopsis Sequence Match ( AT4G38690.1 )
(BLAST)

001: MGSHLSKQLE RRKAISTEKK ALTDLEKSCG CEFPGCDYMP SDRKNWMAGV GPEKLHINKI VWPGTHDSAT NKIGIRFVSR PFAKCQSLSI YNQLVAGTRV
101: LDIRVQEDRR VCHGILKTYS VDVVLADLKR FLSETESEIV ILEIRTEFGH EDPPEFDKYL VEQLGEHLIH QDDHVFSKTV AELLPKRVIC VWKPRKSPQP
201: KHGDPLWSAG YLKDNWIDTD LPSTKFESNI KHLSQQQPAT SRKFFYRVEN TVTPQPDNPI MCVKPVTKRI HCYAKVFIIE CVKRGCADKL QIFSTDFIDN
301: EFVDACVGLT FARAEGKA

Arabidopsis Description

AT4g38690/F20M13_250 [Source:UniProtKB/TrEMBL;Acc:Q9SZP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.