Factsheet for Bra034664.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 2
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71207	Canola	cytoskeleton, cytosol, peroxisome	95.7	82.6
CDX76304	Canola	cytoskeleton, cytosol, peroxisome	83.87	80.41
CDY58809	Canola	peroxisome	83.87	80.41
CDY17494	Canola	cytoskeleton, cytosol, peroxisome	93.82	78.43
Bra034663.1-P	Field mustard	cytosol	55.91	65.41
AT4G34930.1	Thale cress	plastid	67.74	64.45
PGSC0003DMT400059705	Potato	cytosol	46.77	54.72
Solyc10g055240.1.1	Tomato	cytosol	46.24	54.09
VIT_03s0038g02090.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	45.97	53.77
PGSC0003DMT400004106	Potato	cytosol, nucleus, peroxisome	45.97	53.77
PGSC0003DMT400004107	Potato	cytosol, mitochondrion, plastid	46.24	53.25
Solyc01g111260.2.1	Tomato	nucleus	45.43	53.14
Solyc01g111250.2.1	Tomato	cytosol, nucleus, peroxisome	45.43	53.14
Bra010731.1-P	Field mustard	cytosol	44.09	51.57
PGSC0003DMT400059701	Potato	cytosol	28.23	50.24
KRH51412	Soybean	cytosol	41.94	49.21
KRH24254	Soybean	cytosol	41.67	48.9
TraesCS5A01G328000.1	Wheat	cytosol	41.4	47.68
TraesCS5B01G328000.1	Wheat	plastid	40.86	47.06
TraesCS5D01G333900.1	Wheat	plastid	40.59	46.75
EER99259	Sorghum	cytosol	42.47	46.61
HORVU5Hr1G083100.1	Barley	plastid	40.32	46.44
TraesCS5A01G327600.1	Wheat	cytosol	41.94	46.15
TraesCS5D01G333500.1	Wheat	cytosol	41.67	46.13
Zm00001d006231_P001	Maize	cytosol, mitochondrion	39.52	46.08
TraesCS5B01G327500.1	Wheat	cytosol	41.67	45.86
HORVU5Hr1G045890.1	Barley	plastid	40.05	44.88
KRH29259	Soybean	plasma membrane	30.11	44.27
HORVU5Hr1G082990.1	Barley	plastid	20.16	19.68

Protein Annotations

EnsemblPlants:Bra034664.1	EnsemblPlants:Bra034664.1-P	EnsemblPlantsGene:Bra034664	Gene3D:3.20.20.190	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008081	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR000909
InterPro:IPR017946	InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	PANTHER:PTHR13593	PANTHER:PTHR13593:SF35	PFscan:PS50007
SMART:SM00148	SUPFAM:SSF51695	UniParc:UPI00025461C1	UniProt:M4F0R9	MapMan:35.2	:

Description

AT4G34930 (E=1e-150) | 1-phosphatidylinositol phosphodiesterase-related

Coordinates

chrA08:-:12206761..12208495

Molecular Weight (calculated)

42604.4 Da

IEP (calculated)

4.734

GRAVY (calculated)

-0.299

Length

372 amino acids

Sequence
(BLAST)

001: MDFFKNLADS FVKEVVDPTV SFAEDSARTV AGEVVDPTVS FAEDSARTVV REVVDPTVAF VEDSAKTVVR EVVDPTVAFV EDSARTVVRE VIDPAVAFIE
101: TQFQRPRDVI EQEKILDNLL ASNGSRFPGD DYHSPDRKNW MSLLSCEKLT LNKIVWPGTH DSATNGIGID VVTRPLGECQ TLSIYEQLVR GTRLLDVRVQ
201: EDRHICHGIL ASYNVDFAID DVIRFLSETH SEIIILEIRT EYGHKDPPEF EIYLTNKLGQ FLIQQDDNLF NKSLSEILPK RVICIWKPRE SPRPSRGGLL
301: WNSDYLKDNW IDTDLPWTKF QSNMNHLKDQ PSISSRRFFY RVENTLTPQA DNVVMWVRPV TDRIRRIALV YD

Best Arabidopsis Sequence Match ( AT4G34930.1 )
(BLAST)

001: MSFFGKLADT VVSFANDSAK SVVEEVVNPT VSFANNSART VVEEVVNPTV SFANDSARTV VEKVLNPTVS FIDSQLQRPR DVLVQQQILD NLQESNGSNF
101: PGDDYHSPDR KNWMAHLSVD KLTLNKIVWP GTHDSATNGI GDPLVTRWLG ECQTLSIFDQ LVLGTRVLDI RFQEDRCVCH GALSSYNVDV VLNDVIRFVS
201: ETQSEIIILE IRTEFGKKDP FEFETYLVDK LGQFLIHQDD NLFNKPVSEI LPKRVICIWK PRESPKPSRG GILWNSDYLK DNWIDTDLPW TKFQSNLKHL
301: SEQQPISSRK FFYRVENTVT PQADNPVVWV KQVTDRIRKH ARLFISQCAS KGYGDKLQIL STDFIEGDFV DACVGLTHAR MKGQFDKISP S

Arabidopsis Description

At4g34930 [Source:UniProtKB/TrEMBL;Acc:Q9SW42]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.