CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytoskeleton, cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034664.1-P	Field mustard	cytosol	82.6	95.7
CDY17494	Canola	cytoskeleton, cytosol, peroxisome	96.75	93.71
CDY58809	Canola	peroxisome	83.76	93.04
CDX76304	Canola	cytoskeleton, cytosol, peroxisome	83.53	92.78
CDY58810	Canola	peroxisome	56.61	76.49
CDY17493	Canola	peroxisome	56.15	76.1
AT4G34930.1	Thale cress	plastid	65.89	72.63
VIT_03s0038g02090.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	47.56	64.47
PGSC0003DMT400059705	Potato	cytosol	46.87	63.52
Solyc10g055240.1.1	Tomato	cytosol	46.4	62.89
PGSC0003DMT400004106	Potato	cytosol, nucleus, peroxisome	46.17	62.58
Solyc01g111260.2.1	Tomato	nucleus	45.94	62.26
PGSC0003DMT400004107	Potato	cytosol, mitochondrion, plastid	46.64	62.23
Solyc01g111250.2.1	Tomato	cytosol, nucleus, peroxisome	45.71	61.95
CDX90289	Canola	cytosol	45.01	61.01
CDY12097	Canola	plasma membrane	44.55	60.38
KRH51412	Soybean	cytosol	43.16	58.68
KRH24254	Soybean	cytosol	42.46	57.73
KRH29259	Soybean	plasma membrane	32.95	56.13
TraesCS5A01G328000.1	Wheat	cytosol	41.53	55.42
EER99259	Sorghum	cytosol	43.16	54.87
Zm00001d006231_P001	Maize	cytosol, mitochondrion	40.6	54.86
TraesCS5B01G328000.1	Wheat	plastid	41.07	54.8
TraesCS5D01G333900.1	Wheat	plastid	40.6	54.18
TraesCS5D01G333500.1	Wheat	cytosol	42.23	54.17
TraesCS5A01G327600.1	Wheat	cytosol	42.46	54.14
HORVU5Hr1G083100.1	Barley	plastid	40.37	53.87
TraesCS5B01G327500.1	Wheat	cytosol	42.23	53.85
PGSC0003DMT400059701	Potato	cytosol	25.52	52.63
HORVU5Hr1G045890.1	Barley	plastid	37.59	48.8
HORVU5Hr1G082990.1	Barley	plastid	17.87	20.21

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.2	GO:A0A078JZX4	UniProt:A0A078JZX4	EnsemblPlants:CDY71207	ProteinID:CDY71207
ProteinID:CDY71207.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00012114001	InterPro:IPR000909	InterPro:IPR017946
InterPro:PLC-like_Pdiesterase_TIM-brl	InterPro:PLipase_C_PInositol-sp_X_dom	PFscan:PS50007	PANTHER:PTHR13593	PANTHER:PTHR13593:SF35	SMART:SM00148
SUPFAM:SSF51695	UniParc:UPI0004EEE2C4	:	:	:	:

Description

BnaAnng36510DBnaAnng36510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZX4]

Coordinates

chrLK044910:+:1428..2723

Molecular Weight (calculated)

49198.1 Da

IEP (calculated)

4.758

GRAVY (calculated)

-0.261

Length

431 amino acids

Sequence
(BLAST)

001: MDFFKNLADS FVKEVVDPTV SFAEDSARTV AREVVDPTVS FAEDSARTVL REVVDPTVAF VEDSARTVAR EVIDPTVSFA EDSAKTVVRE VVDPTVAFVE
101: DSARTVVREV IDPAVAFIET QFQRPRDVIE QEKILDNLLA SNGSRFPGDD YHSPDQKNWM AHLSVEKLTL NKIVWPGTHD SATNGIGIDV VTRPLGECQT
201: LSIYEQLVRG TRLLDVRVQE DRHICHGILA SYNVDFAIDD VIRFLSETHS EIIILEIRTE YGHKDPPEFE SYLTNKLGQF LIHQDDNLFN KSLSEILPKR
301: VICIWKPRES PRPSRGGLLW NSDYLKDNWI DTDLPWTKFQ SNINHLKDQP SISSRRFFYR VENTLTPQAD NVVVWVRPVT DRIRRYARLF VSRCIAEGCI
401: DKLQIFSTDF IDEDFVDACV GLTYARINGR I

Best Arabidopsis Sequence Match ( AT4G34930.1 )
(BLAST)

001: MSFFGKLADT VVSFANDSAK SVVEEVVNPT VSFANNSART VVEEVVNPTV SFANDSARTV VEKVLNPTVS FIDSQLQRPR DVLVQQQILD NLQESNGSNF
101: PGDDYHSPDR KNWMAHLSVD KLTLNKIVWP GTHDSATNGI GDPLVTRWLG ECQTLSIFDQ LVLGTRVLDI RFQEDRCVCH GALSSYNVDV VLNDVIRFVS
201: ETQSEIIILE IRTEFGKKDP FEFETYLVDK LGQFLIHQDD NLFNKPVSEI LPKRVICIWK PRESPKPSRG GILWNSDYLK DNWIDTDLPW TKFQSNLKHL
301: SEQQPISSRK FFYRVENTVT PQADNPVVWV KQVTDRIRKH ARLFISQCAS KGYGDKLQIL STDFIEGDFV DACVGLTHAR MKGQFDKISP S

Arabidopsis Description

At4g34930 [Source:UniProtKB/TrEMBL;Acc:Q9SW42]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.