CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytoskeleton, cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76304	Canola	cytoskeleton, cytosol, peroxisome	86.97	99.74
CDY58809	Canola	peroxisome	86.74	99.48
CDY71207	Canola	cytoskeleton, cytosol, peroxisome	93.71	96.75
Bra034664.1-P	Field mustard	cytosol	78.43	93.82
CDY58810	Canola	peroxisome	53.48	74.61
CDY17493	Canola	peroxisome	53.03	74.21
AT4G34930.1	Thale cress	plastid	62.92	71.61
VIT_03s0038g02090.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	45.84	64.15
PGSC0003DMT400059705	Potato	cytosol	45.39	63.52
Solyc10g055240.1.1	Tomato	cytosol	45.17	63.21
PGSC0003DMT400004106	Potato	cytosol, nucleus, peroxisome	44.72	62.58
Solyc01g111260.2.1	Tomato	nucleus	44.49	62.26
Solyc01g111250.2.1	Tomato	cytosol, nucleus, peroxisome	44.49	62.26
PGSC0003DMT400004107	Potato	cytosol, mitochondrion, plastid	45.17	62.23
CDX90289	Canola	cytosol	43.6	61.01
CDY12097	Canola	plasma membrane	43.15	60.38
KRH51412	Soybean	cytosol	41.8	58.68
KRH24254	Soybean	cytosol	41.35	58.04
KRH29259	Soybean	plasma membrane	31.69	55.73
TraesCS5A01G328000.1	Wheat	cytosol	40.0	55.11
EER99259	Sorghum	cytosol	41.8	54.87
Zm00001d006231_P001	Maize	cytosol, mitochondrion	39.1	54.55
TraesCS5B01G328000.1	Wheat	plastid	39.55	54.49
TraesCS5D01G333500.1	Wheat	cytosol	40.9	54.17
TraesCS5A01G327600.1	Wheat	cytosol	41.12	54.14
TraesCS5D01G333900.1	Wheat	plastid	39.1	53.87
TraesCS5B01G327500.1	Wheat	cytosol	40.9	53.85
HORVU5Hr1G083100.1	Barley	plastid	38.88	53.56
PGSC0003DMT400059701	Potato	cytosol	24.49	52.15
HORVU5Hr1G045890.1	Barley	plastid	36.18	48.49
HORVU5Hr1G082990.1	Barley	plastid	17.3	20.21

Protein Annotations

Gene3D:3.20.20.190	MapMan:35.2	GO:A0A078FWI2	UniProt:A0A078FWI2	EnsemblPlants:CDY17494	ProteinID:CDY17494
ProteinID:CDY17494.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008081	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00095681001	InterPro:IPR000909	InterPro:IPR017946	InterPro:PLC-like_Pdiesterase_TIM-brl
InterPro:PLipase_C_PInositol-sp_X_dom	PFscan:PS50007	PANTHER:PTHR13593	PANTHER:PTHR13593:SF35	SMART:SM00148	SUPFAM:SSF51695
UniParc:UPI0004EEA6C2	:	:	:	:	:

Description

BnaC03g65690DBnaC03g65690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWI2]

Coordinates

chrLK032074:+:282975..284445

Molecular Weight (calculated)

50819.2 Da

IEP (calculated)

4.991

GRAVY (calculated)

-0.218

Length

445 amino acids

Sequence
(BLAST)

001: MDFFKNLADS FVKEVVDPTV SFAEDSARTV AREVVDPTVS FAEDSARTVV REVVDPTVAF VEDSARTVAR EVIDPTVSFA EDSAKTVVRE VVDPTVAFVE
101: DSARTVVREV IDPAVAFIET QFQRPRDVIE QEKILDNLLA SNGSRFPGDD YHSPDRKNWM AHLSVEKLTL NKIVWPGTHD SATNGIGIDV VTRPLGECQT
201: LSIYEQLVRG TRLLDVRVQE DRHICHGILA SYKVDFVIDD VIRFLSETHS EIIILEIRTE YGHRDPPEFE SYLTNKLGQF LIHQNDNLFN KSLSEILPKR
301: VICIGGGRKY FSLSYTIFLI LLESPRPSRG GRLWNSDYLK DNWIDTDLPW TKFQSNMNHL KDQPSLSSRR FFYRVENTLT PQADNVVVWV RPVTDRIRRY
401: ARLFISRCIA EGCIDKLQIF STDFIDEDFV DACVGLTYAR INGRI

Best Arabidopsis Sequence Match ( AT4G34930.1 )
(BLAST)

001: MSFFGKLADT VVSFANDSAK SVVEEVVNPT VSFANNSART VVEEVVNPTV SFANDSARTV VEKVLNPTVS FIDSQLQRPR DVLVQQQILD NLQESNGSNF
101: PGDDYHSPDR KNWMAHLSVD KLTLNKIVWP GTHDSATNGI GDPLVTRWLG ECQTLSIFDQ LVLGTRVLDI RFQEDRCVCH GALSSYNVDV VLNDVIRFVS
201: ETQSEIIILE IRTEFGKKDP FEFETYLVDK LGQFLIHQDD NLFNKPVSEI LPKRVICIWK PRESPKPSRG GILWNSDYLK DNWIDTDLPW TKFQSNLKHL
301: SEQQPISSRK FFYRVENTVT PQADNPVVWV KQVTDRIRKH ARLFISQCAS KGYGDKLQIL STDFIEGDFV DACVGLTHAR MKGQFDKISP S

Arabidopsis Description

At4g34930 [Source:UniProtKB/TrEMBL;Acc:Q9SW42]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.